Pseudobdellovibrio exovorus: A11Q_863
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Entry
A11Q_863 CDS
T02492
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bex
Pseudobdellovibrio exovorus
Pathway
bex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A11Q_863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bex03019
]
A11Q_863
Enzymes [BR:
bex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A11Q_863
Messenger RNA biogenesis [BR:
bex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A11Q_863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_19
ERCC3_RAD25_C
P-loop_SecA
AAA_22
Phage_integrase
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AGH95081
UniProt:
M4VAP2
LinkDB
All DBs
Position
complement(854015..855319)
Genome browser
AA seq
434 aa
AA seq
DB search
MNTSASTPFQFSDLALIEPILTAIKKAGYQNPTPIQQMAIPHLLKGSDLLGCAQTGTGKT
AAFALPILNNIVQNKLFAGPKQVSCLILTPTRELALQIHENFKTYSANLNLHINVVYGGV
GINPQIQALRSGSDVLIATPGRLLDLISQKSVSLQKVKIFVLDEADRMLDMGFIQDIRKV
LFMMPKERQTLLFSATMPPEIEKLASTMLVKPIKVEASPVSSTADRIKQYVMYVEQSKKR
ELLKHILEDANFYRVIVFTRTKHGANRVSDVLTKSNIPSEAIHGNKSQNARQRALDNFKN
NKTRVLIATDIAARGIDVDGITHVINYEVPNISESYVHRIGRTARAGAEGVAISFCDAEE
KSFIRDIEKLTGHKIEVNRDHPFHSDAVENATTLSKGKAKAQIEKKANSPFKDSRFQPKK
KRFHDRFRKNQKQK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
gtgaatacatctgcatcaactccatttcagtttagtgaccttgctttaatcgaacccatt
ttgacggctattaaaaaagcgggctatcaaaatcctacgcctattcagcaaatggctatc
ccccatctgctcaaaggcagtgatttacttggttgtgctcagacagggacagggaaaact
gctgcgtttgccttacccattttaaataatatcgttcaaaataaacttttcgctggccct
aaacaagtaagctgtttgatcttaacgcctacccgcgagttggcgctgcaaattcacgaa
aacttcaaaacttactctgctaacttgaatttgcatatcaatgttgtctatggcggcgtc
ggcataaacccgcaaatacaagctttacgctcaggctctgacgtcttgattgcaacaccg
ggacgcttattagacttaatcagccaaaaaagtgtctcgttacaaaaagtcaaaatcttt
gtcctcgacgaagcggaccgcatgttagatatgggctttattcaggatattagaaaagtc
cttttcatgatgccgaaagagcgacagacattgcttttctctgccacgatgccacccgaa
atcgaaaagttagcatcaactatgttggttaagccaattaaagttgaggcctctcctgtt
tcatcgacagccgacagaatcaaacagtacgtcatgtatgtcgaacaatcgaaaaaaaga
gagcttctgaagcatattctagaagatgcaaatttttatcgcgttattgttttcacaaga
acgaagcatggggccaatcgcgtttcagatgttttaactaaaagcaatattccatctgaa
gctatccatgggaacaagtcacaaaatgcccgccaacgcgctctcgacaattttaaaaat
aacaaaacacgtgttttgattgcaacggatattgctgctcgaggtattgatgttgatggc
attactcacgttattaactatgaagtaccgaatatttctgaaagttatgttcaccgcata
ggtagaacagcccgagccggcgcagagggcgtcgctatctctttctgtgatgctgaagaa
aagtcctttatccgtgatattgaaaagctaacaggtcacaaaattgaagtgaatcgcgat
catcctttccattctgatgccgtagaaaatgcgacgactctgtcaaaagggaaagcaaaa
gctcagattgaaaagaaagcgaattcaccatttaaagattcaagatttcagccgaagaaa
aaacgctttcacgatcgttttagaaaaaatcaaaaacaaaaataa
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