Bartonella elizabethae: NCTC12898_00140
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Entry
NCTC12898_00140 CDS
T06159
Symbol
rnd_1
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bez
Bartonella elizabethae
Brite
KEGG Orthology (KO) [BR:
bez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bez03016
]
NCTC12898_00140 (rnd_1)
Enzymes [BR:
bez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NCTC12898_00140 (rnd_1)
Transfer RNA biogenesis [BR:
bez03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NCTC12898_00140 (rnd_1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
ANAPC5
Recombinase
Motif
Other DBs
NCBI-ProteinID:
VEJ39744
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All DBs
Position
1:212346..212966
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AA seq
206 aa
AA seq
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MAEIRVHQGDLPNLDNYKTDAVAIDTETLGLQPHRDRLCVVQISPGDGTADIIQIAKGQK
SAPNLSKLLKDNAVTKIFHFGRFDLAILAHTFGVMPEAVFCTKIASKLTRTYTDRHGLKE
ICNELLNVNISKQQQSSDWAAETLSQAQIEYAASDVLYLHRLKVIFEERLRREERESVAK
ACFQFLPMRAKLDLLGWSEVDIFAHS
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggctgagattcgcgttcatcaaggtgatttgccaaacttagacaattataaaactgat
gccgttgcgattgatactgagactttaggattacaaccacatcgtgatcgtttgtgtgtt
gttcagatttctcctggagatggaactgcggatattatacaaattgctaaaggacaaaaa
agtgctcctaatttgtccaagcttcttaaagataatgcagttaccaaaatattccatttt
gggcgttttgatcttgctattttagcgcatacatttggtgttatgccagaggctgttttt
tgtacaaagatcgcttcaaaactcacgcgtacctatacggatcgtcatggcttgaaagaa
atttgtaatgaattgctgaatgtaaatatttctaaacagcaacaatcttcggattgggcg
gcagaaacgttatcacaggcacaaattgaatatgctgcatcggatgtgttatatttgcat
cgtttgaaggttatatttgaagaacgtttaagacgcgaggagcgagaaagtgttgctaag
gcgtgctttcaatttttgcctatgagagctaagcttgaccttttaggatggtcggaagtt
gatatttttgcccatagctaa
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