Bartonella elizabethae: NCTC12898_00421
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Entry
NCTC12898_00421 CDS
T06159
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bez
Bartonella elizabethae
Pathway
bez03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC12898_00421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bez03400
]
NCTC12898_00421
Enzymes [BR:
bez01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NCTC12898_00421
DNA repair and recombination proteins [BR:
bez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC12898_00421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
VEJ40543
LinkDB
All DBs
Position
1:complement(515110..515949)
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AA seq
279 aa
AA seq
DB search
MLNQTPYSISYEELLNFYKESGVDAVLTDLPIDRFKQSACSEKKLTPVVNISHNQQTSPK
TSPTVKLDHHPLHNSRSIQNEPSAVESAKNATTLDELKSALLAFNGCSLKLTAKNTCFSD
GTAGSPLMLIGEAPGRDEDLQGIPFVGKAGMLLNKILASIGLTRNNVYIANTIPWRPPGN
RTPTPREIALCRPFIERHIYLARPRVLIALGGVAAQFLTGSQNGIIRTRGKWHVYESEDN
IKIPVMPTFHPAYLLRTPSQKKLTWIDFLEVKNRLDSLL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatcaaacgccgtactcaatttcctatgaagaacttttgaacttttataaagaa
agtggtgtggatgctgttttgacagatttaccgattgatcgttttaagcagtctgcttgt
tcagagaaaaaattaacacctgttgtaaacatttctcataatcaacaaacatcccccaaa
acatctccaactgtaaaattagatcatcatccgctccataactcgaggtctatacaaaac
gaaccttctgctgtagagagtgccaagaatgcaacgacacttgatgaattaaaatctgct
cttcttgcatttaatggctgttcattaaaattgacagcaaaaaacacctgtttttcagat
ggaacagcaggaagccccctgatgcttataggtgaagccccaggacgagatgaggatcta
caaggcattccttttgtgggaaaagcaggaatgttactgaataaaatcctcgcatcaatt
ggcttaacaagaaataatgtgtacattgctaatactattccttggcgtcctccaggaaat
cgtacaccaacaccaagagaaattgccttgtgccgcccttttattgaacgacacatttat
ttagcacgtcctcgtgtgctcatagcactaggaggcgttgcggcacaattccttaccgga
tctcaaaatgggatcatccgaacacgtgggaaatggcatgtttatgaaagtgaggataat
ataaagatacctgttatgccaacttttcaccctgcttaccttcttagaacccctagtcaa
aagaagcttacatggatagactttttagaagtaaaaaatcgtctcgatagccttttgtaa
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