Bartonella elizabethae: NCTC12898_00601
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Entry
NCTC12898_00601 CDS
T06159
Symbol
rnd_2
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bez
Bartonella elizabethae
Brite
KEGG Orthology (KO) [BR:
bez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bez03016
]
NCTC12898_00601 (rnd_2)
Enzymes [BR:
bez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NCTC12898_00601 (rnd_2)
Transfer RNA biogenesis [BR:
bez03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NCTC12898_00601 (rnd_2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
VEJ41185
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All DBs
Position
1:complement(715518..716672)
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AA seq
384 aa
AA seq
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MMNLITQTTDLEIALNALRTSDFVTVDTEFIRETTFWPQLCLIQLASPDVTVLIDPIAPD
IDLQAFFDLMIDKKIVKVFHSARQDIETIYYLGGVIPSPLFDTQIAGSICGFGDSISYDQ
IVQRCTGHHLDKSSRFTDWSCRPLSEKQLLYAVADVTHLRDVYLLLKKRLEKNQRTHWMD
DEITILLNPKTYDMPEDEAWKKVKGKVKKPRELAVLQKIAAWREREARKHNMPRRHIMKD
ECLIEIATQQPKDESALKRLRSLNKNWDKRSMTSSLIKAVHEGLEADLSTLPPIPKYNPL
NDTTAAAIDLLKVLLKLVADENSIAPKIIATSSDLEKIANGGIKKNIPAMNGWRYEIFGQ
KAEQLLKGQIGFYFNDGKISTKQL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcttattacacaaacaacagatcttgaaattgcacttaacgctctacggacc
tctgattttgtaacagttgatactgagtttatccgcgaaacaactttttggcctcaactg
tgtttaatccagctcgcatcaccagatgttacagtcctgattgatcccatagccccagat
attgatttacaagcattttttgacctcatgatcgataaaaaaattgtcaaagtttttcac
tctgctcgccaagatattgaaacgatttattatcttggaggcgttattccttcccctctc
ttcgacacacaaatagccggatcaatttgcggatttggtgattcgatatcctatgatcaa
attgtacagcgctgcacggggcatcatcttgataaatcttcccgctttacagattggagt
tgtcgccccctgtctgaaaaacaattactctatgccgttgctgatgtcactcatctaaga
gatgtctatctcctcttgaaaaaaagattagaaaaaaatcaacggactcactggatggat
gatgaaataactatcctcttaaatcctaaaacctatgatatgccagaagatgaagcatgg
aaaaaagtgaaaggaaaagttaaaaaaccgcgtgaacttgctgtactacaaaagatagcc
gcttggcgtgaacgtgaagcacgaaaacacaatatgccccgtcgtcatatcatgaaagat
gaatgtctcatagaaatagcaacccaacaaccaaaagatgaatctgcgttaaaacggttg
cgcagccttaataaaaattgggataaacgttcaatgacgtcatcattaatcaaggctgtc
cacgaaggcttagaggcggatctttctactttaccccctattcctaaatataacccactc
aatgatacgacagccgctgctatcgatctgctcaaagtattattaaaacttgttgcagac
gaaaacagcattgcccccaaaattattgcgacatctagtgatttagaaaaaatcgccaat
ggaggaataaagaaaaatatccctgctatgaatggctggcgctatgaaatatttggtcaa
aaagctgaacaactgctaaagggacagataggattttactttaacgatggaaaaataagt
acaaaacagctttaa
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