Bartonella elizabethae: NCTC12898_00754
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Entry
NCTC12898_00754 CDS
T06159
Name
(GenBank) Putative ribonuclease J Rv2752c
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bez
Bartonella elizabethae
Pathway
bez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12898_00754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bez03019
]
NCTC12898_00754
Messenger RNA biogenesis [BR:
bez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC12898_00754
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Ortholog
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GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
RMMBL
RNase_J_C
Lactamase_B
Lactamase_B_3
KYNU_C
Motif
Other DBs
NCBI-ProteinID:
VEJ41331
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Position
1:complement(878561..880237)
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AA seq
558 aa
AA seq
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MVATSKCEFVFLPLGGVGEIGMNLAAYGFGSQNLREWLLVDMGVSFAGSELPGVDLVLPD
IRFLESEKHNIRGLVLTHAHEDHYGAVLDLWPKLQVPVYCTAFTAGLLESKRQSDFESQK
MSFNIFQAGDCFQVGSFAIEAIAVNHSIPESVSLAITTSLGTVIHTGDWKIDHTPSLGAV
TDEKRFRALGDKGVLALLCDSTNACRDGISPSEQQVQTSLSEIISKAEGRVAIATFASNI
GRIRSIALAAQAVGRKVLVIGRSLKRSIMVAQELGYMDGLAPFVTEDDYGYIPRKELVLI
VTGSQGEPCAALAKLSREGMRNIVLSTGDTVIYSSRSIPGNEKAILEIQNRFIDLGIKVI
TNEDALVHVSGHPRRSELLQMYDWIKPQILVPVHGEAIHLTAQAALARQAGIKIVRDIRN
GNMLRLAPTPVEVIDYVPVGRIYKDGCLLGDEYELGIRERRKLSYAGHVAVSLHMNSKHE
LLDDIGLSILGLPESNGEGEKLKDILLEVVENTVYNIPRMKRKNNEVIREATRRAVRAAV
YEIWQKKPLCTVFLHQSK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggttgcaaccagtaaatgtgaatttgtttttttacctctgggtggtgtaggtgaaata
ggaatgaatttagctgcttatggatttggctcccaaaatcttcgtgaatggttacttgtt
gatatgggcgttagttttgctggttctgaattaccaggagttgatcttgttctccctgat
attcgttttttagaaagtgaaaaacataatatacgtggtcttgttttaacacacgcacat
gaagatcattatggggctgttcttgatttatggccaaaattacaagttccagtttattgt
acagctttcacggcagggttattggaaagtaaaaggcaatcagattttgaatctcaaaaa
atgtcatttaatatttttcaagcaggggattgttttcaggttggttcctttgccatagag
gcaattgctgttaatcattcgataccagaatctgtatctttagccattacaacgtctttg
gggactgtaattcatacgggtgattggaaaattgatcatacgccttcgcttggagctgtg
acggatgaaaaaagatttcgagcgttaggcgataaaggtgttttagcattgctttgtgat
tccacaaacgcatgtcgggatggtatatctccatcagagcagcaggtccaaaccagtctt
tctgagattatttcgaaagctgaaggacgtgttgcaatagcaacttttgcttctaatatt
ggtaggatacgttctattgctcttgctgctcaagctgttgggcgtaaggttcttgtcatt
gggcgttcccttaaacgaagtattatggttgcacaagagcttggttatatggatgggtta
gcgccatttgtaacggaagatgattatggttacatcccacgaaaagaacttgttttaatt
gtcacagggagccaaggtgagccatgtgctgctttggctaagctgtcacgtgaggggatg
aggaatattgtgctttctactggagatactgttatttattcatcgcgaagtattccagga
aatgaaaaagcgattcttgagatacaaaatcgttttatcgatttgggtattaaagtgatt
acgaatgaagatgcccttgttcatgtttcaggtcatccccgtcgttcagaacttttacag
atgtatgattggataaaaccacagatacttgtgcctgtgcatggtgaggcaatacatctt
actgctcaagcggctttagcgcgtcaagcagggattaaaattgttagggatattagaaat
ggtaatatgctacgtcttgcaccaacgcctgtagaagttattgattacgtgcctgttggt
cgtatttataaggatggctgtcttcttggagatgagtatgagctagggattcgtgagcgt
agaaaattaagttatgctggtcatgttgcagtttctctccatatgaatagcaagcatgag
ttattggatgatatcggtctaagcatattgggactccctgaaagtaatggagagggggaa
aaattaaaagatattcttttagaggttgtggaaaatacagtttataacattccacgcatg
aagcgaaaaaataatgaagttattcgagaggcaacacgacgtgcagtaagagcggctgtt
tatgaaatttggcaaaaaaaacctctctgtacagtttttttacatcagtcaaaataa
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