Bartonella elizabethae: NCTC12898_00977
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Entry
NCTC12898_00977 CDS
T06159
Symbol
rhlE_2
Name
(GenBank) ATP-dependent RNA helicase rhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bez
Bartonella elizabethae
Pathway
bez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12898_00977 (rhlE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bez03019
]
NCTC12898_00977 (rhlE_2)
Enzymes [BR:
bez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC12898_00977 (rhlE_2)
Messenger RNA biogenesis [BR:
bez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC12898_00977 (rhlE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
VEJ41545
LinkDB
All DBs
Position
1:complement(1104968..1106383)
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AA seq
471 aa
AA seq
DB search
MKVVQLREVFILPIKKEDVFKKLGLPTLLIKNLRISGMSKPKPIQEQAIPMMLKGHDILG
IAQTGSGKTLAFGLPILSQILTLGDKRCPKTARALILAPTRELAVQIDEAIRTVAKGAHL
STCLIFGGVSRLKQIKRMEAGVDVLIATPGRLRDLVREKCVDLSQSRFLILDEADRMLDM
GFIHDVKQIAKLLHQERQTALFSATMPKEIAALAKCLLNDPVKIEVVPQGTTAVEIAQKL
YCVPTSEKKNVLSKLLTNPAFNSVIVFTRTKHGADAVTRHLAKIGYLVTTIHGNKSQGAR
QSALKAFRERSVQILVATDIAARGIDIPGISHVINYDLPDEAESYVHRIGRTGRNGACGE
ALTLFDEKIERARLRAIERLIRMKLVSESVPEQFAAFPEKPNVSKSEERENNKERRLKKS
KRQKRFLGQKDDAAQLQRKNSSSPNERHKKAKAAAKRAKAFRFRKSVKKAA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagttgttcagctgagggaagtttttattttgcctataaaaaaagaagatgttttt
aagaagttaggtttgcctactcttttgattaaaaatttgcgcatttctgggatgagtaaa
cctaaacctatacaggaacaagctattccaatgatgttgaaaggacacgatattttaggg
attgcacagacaggttctggaaaaactttggcatttggtttgcctattttaagtcaaatt
ttaactttgggtgacaaacgctgtcctaaaactgcacgtgctttgattttagcgccaacc
cgtgaacttgctgttcagattgacgaagcaattcgcactgtggcgaaaggagcgcacctt
tcgacgtgtcttatttttgggggagtatcacgtttaaaacaaattaaacgtatggaagca
ggtgtggatgttttgatagccactccagggcgtttgagagatcttgttcgtgaaaaatgt
gttgatctttctcaatctcgttttttgattttggatgaagcagatcgtatgttggatatg
ggatttattcatgatgttaagcaaattgcaaagcttttgcatcaagagcgtcagacagca
cttttttctgcaacaatgccaaaagaaattgctgcgctcgcaaagtgtttactcaatgat
cctgtgaagattgaagttgttcctcaaggcactacagctgtagagattgcccagaaatta
tattgtgttcctacgagtgaaaaaaagaatgttttaagtaaacttttgacaaatccagct
tttaattcggttattgtttttacgcgaacgaaacatggggctgatgctgtcacacgtcat
ttagcaaagataggctatttagttacaacaattcatgggaataaatcacaaggtgctcgc
caatctgctttaaaagcttttcgggaaagatcggtccagatccttgttgcaacagatatt
gcggcacgcggtattgatataccagggataagccacgttattaattatgatttaccagat
gaagctgaaagttatgtgcatcgtattggtcgtacaggacgcaatggtgcatgtggtgaa
gcactgacgctttttgatgaaaaaatagaaagggctcggttgcgtgccatagagcgcttg
attcgtatgaaattggtgtctgaatctgttccagaacaatttgcagcattcccagaaaag
ccaaatgtgtcaaaaagtgaagaaagagaaaataataaagaacgccgtttaaaaaaatct
aaacgtcagaaacggtttttaggtcaaaaagatgatgctgcacagttacagcggaagaat
tcttcttctccaaatgagaggcataaaaaagcaaaagcagcggcaaagcgtgcaaaggct
tttcgttttcgcaagtcagtcaagaaggcggcttaa
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