Bartonella elizabethae: NCTC12898_01015
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Entry
NCTC12898_01015 CDS
T06159
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bez
Bartonella elizabethae
Pathway
bez03420
Nucleotide excision repair
bez03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC12898_01015 (uvrD)
03430 Mismatch repair
NCTC12898_01015 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bez03400
]
NCTC12898_01015 (uvrD)
Enzymes [BR:
bez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12898_01015 (uvrD)
DNA repair and recombination proteins [BR:
bez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC12898_01015 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NCTC12898_01015 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF3553
Tudor_1_RapA
Motif
Other DBs
NCBI-ProteinID:
VEJ41580
LinkDB
All DBs
Position
1:1152436..1154772
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AA seq
778 aa
AA seq
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MNNFSDHIPFFEEDDAPTHDEKNSGIASHVLKNKQSYNIDYLEQLNPEQQQAVINTEGPL
LVLAGAGTGKTRVLTTRISHILRSGLASPQQILAVTFTNKAAREMKIRIGELIGEVVEGM
PWLGTFHSTGAKILRRHAELVDLKRNFTILDSDDVLRLLKQLIQAEGLDDKRWPARNLAM
MIDSWKNQGLSPEHISKSDSHSFGNGMGRDLYHSYQNRLKDLNACDFGDLLLHSISIFQH
NPDILREYHSQFRYILVDEYQDTNTAQYLWLRLLSQHPQGHHVNLCCVGDDDQSIYGWRG
AKVENILRFEKDFPSAQIIRLERNYRSTSHILKAASHLIAHNEERLGKVLFSAQIKSEEE
KVKIHSAWDSAEEARAIGEEIERAKLSGHALNHMAILVRASFQMREFEDRFVTLGLNYRV
IGGPRFYERMEIRDAMAYLRVVVQPADDLAFERIINTPKRSIGDATLRILYESARARAVS
LFSAATDIIETDELKPKTRSALRNLIENFHRWQNMLQDTPHRELAEIILDDSGYTTMWLE
DRSPEAPTRLENLKEMIRSMEQFENLQSFLEHVALVMETENNENMDAVNIMTLHSAKGLE
FETVFLPGWEEGLFPHQRSLDEGGRSGLEEERRLAYVGLTRAKKYLHIWFVSNRRVHGLW
QSALPSRFLDELPTEHIEAIAMETSYGGYGKSSFQHHNCFYNDYATPKQKRVQKNKNIEG
NVITQSISHAPSDFSINDRIFHIKFGYGHITAIDDHKLTIMFEKAGEKRVLDNFVDKA
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttttccgatcacatacctttttttgaagaagatgacgctccaacccatgat
gagaaaaactctgggattgcttcccatgttctaaaaaacaaacaatcatataacatagac
tatttagaacagctcaacccagaacagcaacaagctgttataaatacggagggtcctctt
ttagtccttgcaggtgcaggtactggaaaaacacgcgttttaacaacccgtatttctcat
attctacgctctggacttgcctctcctcaacaaatacttgctgtcacttttaccaacaaa
gcagcccgtgaaatgaaaatacgtattggtgaactcattggtgaagtggtagaaggaatg
ccttggcttggaacttttcattccactggagctaaaattttacgccgccacgcagagctt
gttgatttaaaaagaaattttacaattctcgatagcgatgatgttctccgacttttaaaa
cagcttattcaagctgaagggttagacgacaagcgctggcccgcacgaaaccttgccatg
atgattgattcttggaaaaatcaagggctttcaccagaacatatctcaaaaagtgattcg
cattcctttggcaatggcatgggacgggacctttatcacagttatcaaaatcgattaaaa
gacctgaacgcttgtgattttggcgatcttttgcttcattctatctctatcttccaacat
aatccagatattcttcgcgaatatcattctcaatttcgctatattcttgtcgatgaatat
caagatacaaatacagcacaatatctttggctccgccttttgtcgcaacatcctcaaggt
catcatgttaatctttgttgtgttggcgatgatgaccaatccatttatggatggcgtggt
gcaaaagtcgaaaacatattacgatttgaaaaagattttccttctgcccaaattattcgt
ctagaacgcaattaccgctcaacatctcatattcttaaagccgcctctcatctgattgct
cataatgaagaaagactgggcaaagttcttttctctgctcaaataaaaagtgaggaagaa
aaagtaaaaattcattcagcatgggattcggcagaagaagcgcgagccattggagaagaa
atcgaacgcgctaaactaagcggtcatgccttaaatcatatggctattttggtacgcgca
tcatttcaaatgcgtgaatttgaagatcgctttgtaacgcttggtcttaactatcgcgtc
attggtggtcctcgtttttatgaacgaatggaaatacgtgatgccatggcttatttgcgc
gttgttgtccaaccggctgatgatttagcctttgagcgtattatcaatacccctaaacgc
agcataggcgatgcaaccttgcgcattctttatgagagtgcacgcgcacgtgctgtttct
ctcttttctgcggccactgacatcattgaaacagacgagctaaagcctaagacacgcagt
gctttacgaaaccttattgaaaacttccaccgctggcaaaatatgctgcaagacaccccc
cacagagaacttgccgagatcattcttgatgattctggttatacaaccatgtggttagaa
gaccgctcaccagaagcgcccacacgattagagaaccttaaagaaatgatccgttccatg
gaacaatttgaaaatcttcaaagctttttagaacatgttgcactggtgatggaaacggaa
aataatgagaacatggatgccgtcaacatcatgacacttcattcagccaaaggacttgaa
tttgaaaccgtttttcttccaggttgggaagaaggactctttccccatcagcgctcctta
gatgaaggtggacgttcaggattagaagaagaacgacgtcttgcttatgtagggcttaca
agagcaaaaaaatatctgcatatatggtttgtatccaaccgaagagttcacggactttgg
caatcagctcttccctcccgttttctagatgaactaccaacagaacatatagaagccata
gccatggaaacatcttatggtggttatggaaaatcctcctttcaacatcacaattgcttc
tataatgactatgcaacaccaaaacaaaagcgtgtacaaaaaaacaaaaatattgaaggg
aacgttatcactcaatcaatctctcacgcaccatcagatttttctattaatgatcgaatt
tttcacataaaatttggttatggtcatattaccgcgatagacgatcataaattgacaatc
atgtttgaaaaagctggagaaaagcgtgttctagataattttgtagacaaagcttaa
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