Brachybacterium faecium: Bfae_11370
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Entry
Bfae_11370 CDS
T00965
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bfa
Brachybacterium faecium
Pathway
bfa03420
Nucleotide excision repair
bfa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bfae_11370
03430 Mismatch repair
Bfae_11370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfa03400
]
Bfae_11370
Enzymes [BR:
bfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bfae_11370
DNA repair and recombination proteins [BR:
bfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bfae_11370
MMR (mismatch excision repair)
Other MMR factors
Bfae_11370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
PhoH
Motif
Other DBs
NCBI-ProteinID:
ACU84983
UniProt:
C7MBM6
LinkDB
All DBs
Position
1281429..1284713
Genome browser
AA seq
1094 aa
AA seq
DB search
MTTPPPDAPVRHSAARLAALLEQPPPTAEQTAVIEAPLAPMLVVAGAGSGKTETMASRVV
WLIANGIVEPRQVLGLTFTRKAAHELGERIGARLGALAAALRAEGLALPRGLERGGDDLV
GQRPVVHTYNGFALDLVREHALAVGIDPELTMMSTSASWQLAHEIVEGWDDSLDLEASPA
TLTAALLSLTSSLADHLVTPAQLEAHLRQIRDHLAGIPLQVEGRRRTTPKDVAKVLGALE
SRLALLPLLERFAEIRAADSALDFADQVSLAARVAREVPAASALARRMHRVVLLDEFQDT
SVAQLQMLTDLFGPGHAACAVGDPQQAIYGWRGASAASLAGFATAFAAPEQPVLQRTLST
SWRNDEAVLAAANRLASPLRSAETGVTIPELQPRPGAGEGACEILEAADERAEALAIGRW
ILERRAEQEEDAPPASAAVLVRARRQIPALVDGLERSGLAVAVVGLGGLLHRPEVADVRA
VLECAHDPGRGDALMRLLTGPRLRLGARDLAVLGRWRDRLGARLRRDGETPGGQDEAESV
SLVDAVDDLPPEDWTDPSGRGLSGTGRERLLQVQQILREMRRLLPLPLPDLVTAATRLLD
VDLALLESEPDSRALADLEAFRDHAAAFDRTARRGGLGAYLDLLEISEDEEAGLAVTAAP
EAAHDPAAVTIVTMHSAKGLEWDLVAVAGLTEGTVPSYDLRRAKTDEAGRVRVPADGWLG
TLANAAVPTALRGDADTLPELAWAEADTQVDAESLIQEFRFAQGEESLREDRRLMYVAVT
RARRRLLLTSAAWRTGLSSARPRSRYLTEVTDLVPESFRTVQEVPETNPLESERPQAQWP
PRPGEPEQARARAAALLAEVAGQDDAPADPELAELVRRAVVDLEQQAAPPMVHSPPRLSA
SQVVQQARSPQAAALDLLRPLPRRPSAAAARGTAFHAWLESRYDSATLLDLEDVLDLEDT
PADEAETDHRALREAFTASEWAERSPLVVEQPVHTRIGQIAVRGVIDAVFADPEGTDGSE
GVIVVDWKTGRVPRPAQLRERALQLSLYRLAWHERTGLPLARIRTAFHFVADGITHEVRR
HPSRERIAQLLAGE
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccccgccgccggatgcccccgtccgccattccgccgcgcgcctggccgcgctg
ctcgagcagcctccgcccaccgcggagcagaccgccgtcatcgaagcgccgctggcaccg
atgctcgtggtcgccggcgccggctccggcaagacggagaccatggcctcgcgggtggtg
tggctgatcgccaacggcatcgtcgagccccgccaggtgctgggcctgaccttcacccgc
aaggccgcccacgagctcggcgaacggatcggcgcccggctcggcgcgctcgccgccgcg
ctgcgcgccgaggggctcgcgctgccgcgcggtctcgaacgcggcggcgacgacctcgtg
ggacagcggcccgtggtccacacctacaacggcttcgccctcgacctggtgcgcgagcac
gcgctcgccgtcggcatcgatcccgagctgaccatgatgtcgacctccgcctcctggcag
ctggcgcacgagatcgtcgagggctgggacgactcgctggacctcgaggcctctcccgcg
accctcaccgccgcgctgctctcgctgacctcctccctcgccgatcacctggtcaccccc
gcccagctggaggcgcacctgcgacagatccgcgaccacctcgccggcatcccgctgcag
gtcgagggtcggcgccgcaccaccccgaaggacgtcgcgaaggtgctcggcgcgctcgag
tcccgcctcgcgctgctgccgctgctcgagcgcttcgccgagatccgcgccgcggactcc
gccctggacttcgccgaccaggtctccctcgccgcccgcgtggcgcgggaggtgcccgcc
gcgagcgccctggcgcggcgcatgcaccgggtggtcctgctcgacgagttccaggacacc
tccgtcgcccagctgcagatgctcaccgacctcttcgggcccggccacgccgcctgcgcc
gtcggcgacccgcagcaggcgatctacggctggcgcggtgcctctgccgcctccctggcc
ggcttcgccaccgccttcgccgctcccgagcagccggtgctgcagcgcaccctgtccacc
tcgtggcgcaacgacgaggcggtgctggccgccgcgaaccggctcgcctccccgctgcgc
agcgccgagacgggagtgaccatccccgagctgcagccccgccccggcgcgggggagggg
gcgtgcgagatcctcgaggccgccgacgagcgcgccgaggccctcgcgatcggccgctgg
atcctggagcgccgcgccgagcaggaggaggacgccccgcccgcctcggccgcggtgctg
gtgcgcgcccgccgtcagatccccgccctcgtcgacgggctcgagcgcagcgggctcgcg
gtcgcggtggtgggcctgggcgggctgctgcaccgccccgaggtcgccgatgtgcgggcc
gtgctcgaatgcgcccacgaccccggccgcggcgatgcgctgatgcgcctgctcaccggg
ccgcgtctgcgcctcggcgcccgcgacctcgccgtgctcggccgctggcgggaccggctg
ggagcgcgcctgcgccgcgacggggagacccccggcggccaggacgaggcggagtccgtc
tccctcgtcgacgcggtcgacgacctcccgcccgaggactggacggacccctccgggcgg
gggctgtccggcaccggccgggagcggctgctgcaggtccagcagatcctccgcgagatg
cggcgcctgctgccgctgcccctgccggacctggtcaccgcggcgacccggctgctcgac
gtggacctcgccctgctcgagtccgaacccgactcccgcgcgctcgccgacctcgaggcc
ttccgcgaccacgccgccgccttcgaccgcaccgcccgccgcggagggctcggcgcctac
ctcgacctgctcgagatcagcgaggacgaggaggccgggctcgccgtcaccgccgccccg
gaggccgcgcacgatcccgccgccgtcacgatcgtcaccatgcactccgccaagggcctc
gaatgggacctggtcgcggtcgccgggctcaccgagggcaccgtgccctcctacgatctg
cgccgcgcgaagaccgacgaggcggggcgggtgcgggtcccggccgacggctggctgggc
accctggcgaacgcggccgtgcccaccgccctgcggggcgatgccgacaccctgcccgag
ctggcctgggcggaggccgacacccaggtcgacgcggaatcgctgatccaggagttccgc
ttcgcccagggcgaggagtcgctgcgcgaggaccgccggctgatgtacgtcgcggtcacc
cgggcgcggcgtcgcctgctgctgacctccgccgcctggcgcacgggcctgagctcggcc
cggccccgctcgcgctatctcaccgaggtcaccgatctggtcccggagtccttccgcacc
gtgcaggaggtgcccgagacgaaccccctggagagcgagcggccgcaggcgcagtggccg
ccccggcccggggagccggagcaggcgcgggcgcgcgccgcggcgctgctggccgaggtg
gccgggcaggacgacgccccggccgatcccgagctcgccgagctggtgcgtcgggccgtg
gtggatctcgagcagcaggcggccccgcccatggtgcactcgccgccgcggctgtccgcc
tcgcaggtggtgcagcaggcccgctccccgcaggccgcggcgctggacctgctgcggccc
ctgccccgccggccctcggccgccgcggcccgcggcaccgccttccacgcctggctcgag
tcccgctacgacagcgcgaccctgctggacctcgaggacgtcctggacctcgaggacacg
cccgccgacgaggcggagacggaccaccgggccctgcgggaggcgttcaccgcctccgag
tgggccgagcgctcaccgctcgtggtcgagcagccggtccacacgcgcatcgggcagatc
gcggtgcggggcgtgatcgacgcggtcttcgccgatcccgagggcaccgacggcagcgag
ggcgtgatcgtcgtggactggaagacgggccgcgtgccccgtcccgcccagctgcgcgag
cgtgcgctgcagctgtcgctgtaccgcctggcctggcacgagcgcaccggtctgccgctc
gcgcggatccgcaccgccttccacttcgtggccgacgggatcacgcacgaggtgcgccgc
cacccctcgcgggagaggatcgcgcagctgctcgccggcgagtga
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