Brachybacterium faecium: Bfae_11400
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Entry
Bfae_11400 CDS
T00965
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bfa
Brachybacterium faecium
Pathway
bfa03420
Nucleotide excision repair
bfa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bfae_11400
03430 Mismatch repair
Bfae_11400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfa03400
]
Bfae_11400
Enzymes [BR:
bfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bfae_11400
DNA repair and recombination proteins [BR:
bfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bfae_11400
MMR (mismatch excision repair)
Other MMR factors
Bfae_11400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
HHH
PrkA
Motif
Other DBs
NCBI-ProteinID:
ACU84986
UniProt:
C7MBM9
LinkDB
All DBs
Position
1286851..1288983
Genome browser
AA seq
710 aa
AA seq
DB search
MTDHAAPTDAALSAPSAPEDAESLLAALDPEQREVARSFGTPMCVLAGAGTGKTRAITHR
IAYGVATGQLNPRHVLAVTFTAKAAAEMRSRLRDLGVPAVQARTFHSAALRQLRHFWPRV
VGGAMPDLLTNKFAGVGEACQRLHLSVDRAALHDIVAEVEWSRVSMLTPESYPQAAQQAR
RPGVAGFDARSISRILTQYEEVKKERGVIDFEDVLLHMVGFLTERSDVAREVRGQYKHFV
VDEYQDVSALQHSLLRLWLGTSDDLCVVGDAAQTIYTFAGARASYLLDFRKEFKRARTIR
LERNYRSTPEIVRMANTVLDGAQGRTRETRLTLVSQREGGPPPLVESFPDDPAEADGIAD
RIADLVSQGRPASEIAILFRTNSQSEAFEQALTFRGIGYLVRGGDRFFERQEVRRAMVSL
RAATRVEQLDPARAVRDILSQQGWSPTAPETTGAVRDRWDSLNALVGLTDTVTTRPGTTM
VDVVRELEERAEAQAAPVVDGVTLASVHAAKGLEWPVVFVVGASDGLLPISMAKTPAEVE
EERRLFYVALTRARDLLTVSWAAARTPGARGSRKPSRFLDGVLDHPDAPRPSPGAGPRRT
GRRSATVYAECRVCGQGLVSPREQRLGRHEGCPSAAGPDLLAALRTWRREQARQQGTAPY
AILTDAALDAVAERCPRTEEELLAVPGIGPGKMASFGQELLTLLADHSGK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccatgccgcccccaccgatgccgccctgtccgccccctccgcgcccgaggac
gccgagtcgctgctcgccgccctcgaccccgagcagcgcgaggtggcccgcagcttcggc
accccgatgtgcgtgctcgcgggcgccggcaccgggaagacccgcgccatcacccaccgc
atcgcctacggcgtcgccaccgggcagctgaacccccgccacgtgctcgccgtgaccttc
accgcgaaggccgcggccgagatgcgctcgcgcctgcgggacctcggcgtgcccgccgtg
caggcccgcaccttccactccgccgccctgcgccagctgcgccacttctggccgcgcgtg
gtgggcggcgcgatgccggatctgctgacgaacaagttcgccggcgtcggcgaggcctgc
cagcgcctgcacctgagcgtggatcgtgcggcgctgcacgacatcgtcgccgaggtcgag
tggtcgcgcgtctcgatgctcacccccgagtcctacccccaggccgcgcagcaggcccgt
cggccgggcgtggcgggcttcgacgcccgctcgatctcccgcatcctcacccagtacgag
gaggtgaagaaggagcgcggggtgatcgacttcgaggacgtgctgctgcacatggtcggc
ttcctcaccgagcgctccgacgtggcccgtgaggtgcgcggccagtacaagcacttcgtg
gtcgacgagtaccaggacgtctccgcgctccagcactccctgctgcggctgtggctgggc
acctcggacgacctgtgcgtggtgggggatgccgcccagaccatctacaccttcgccggc
gcccgtgcctcctacctgctggacttccgcaaggagttcaagcgcgcccgcaccatccgg
ctcgagcggaactaccgctccacccccgagatcgtgcggatggccaacaccgtgctcgac
ggcgcgcagggacgcacccgggagacgcgcctgaccctcgtctcccagcgggagggcggc
cctccgccgctggtcgaatccttccccgacgacccggcggaggccgacggcatcgccgac
cggatcgccgatctggtctcccagggccggccggcctccgagatcgcgatcctgttccgc
accaacagccagtccgaggcgttcgagcaggcgctgacgttccgcggcatcgggtatctc
gtgcgcggcggggaccgcttcttcgaacgccaggaggtgcgccgcgccatggtctcgctg
cgcgccgccacccgggtggagcagctcgatccggcccgggccgtgcgcgacatcctctcc
cagcagggctggtcgcccaccgccccggagacgaccggcgccgtccgcgaccgctgggac
tcgctgaacgcgctggtgggcctcaccgacacggtcaccacccggcccggcaccaccatg
gtcgacgtggtccgcgagctcgaggagcgggccgaggcccaggccgcgccggtggtcgac
ggggtcaccctcgcctccgtgcacgccgccaagggcctggaatggccggtggtgttcgtg
gtgggcgcgagcgacggactgctcccgatctcgatggcgaagacccccgccgaggtcgag
gaggagcggcgactgttctacgtggccctcacccgcgcccgggacctgctcaccgtgagc
tgggcggccgcccgcaccccgggggcgcgcggctcgcgcaagccctcccgcttcctcgac
ggggtcctggaccatcccgacgccccgcgcccgtccccgggggcgggtcctcgccgcacc
ggccgccgcagcgccaccgtgtacgcggagtgccgcgtgtgcggccagggcctggtctcc
ccgcgcgagcagcgtctgggccgccacgagggctgcccctcggccgccgggcccgacctg
ctcgcggcgctgcgcacctggcgccgtgagcaggcccgccagcagggcaccgcgccctac
gcgatcctcaccgacgccgcgctcgacgcggtcgccgagcgctgcccgcgcaccgaggag
gagctgctggccgtgccggggatcggcccgggcaagatggcgagcttcggccaggagctg
ctcaccctgctcgccgaccactccgggaaatga
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