Brachybacterium faecium: Bfae_17160
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Entry
Bfae_17160 CDS
T00965
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bfa
Brachybacterium faecium
Brite
KEGG Orthology (KO) [BR:
bfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfa03016
]
Bfae_17160
Enzymes [BR:
bfa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Bfae_17160
Transfer RNA biogenesis [BR:
bfa03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Bfae_17160
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ACU85537
UniProt:
C7MD80
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All DBs
Position
1918416..1919006
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AA seq
196 aa
AA seq
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MRVFVALRPAPSALAHLDAALEDVRAGAGLALRWTDPAQWHLTLSFRPDLPAGALEDALH
DLAAIAARHRPPTLQLSGAGVFDARTLWIGVGGETAPLAALMGEPLLEGEGRERRRAHLT
VARVSARAPRAPRRRRRGDPPPPDPTRLLLADAVRALSVYRGPSWEATELELVSSALGEG
RSGGPLHEVLATVPLG
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgttcgtcgccctccggcccgcgccctccgcgctcgcgcacctggacgcggcg
ctcgaggacgtccgcgccggagcggggctcgccctgcggtggacggatcccgcgcagtgg
catctcaccctctccttccggcccgatctgcccgccggggcgctcgaggacgcgctccac
gacctcgccgcgatcgcggcccgtcaccggccgccgacgctccagctgagcggggccggg
gtgttcgatgcccgcacgctgtggatcggcgtgggaggcgagaccgcgccgctcgcggcg
ctgatgggcgagccgctgctcgagggcgaggggcgggagcggcgccgcgcgcacctgacc
gtcgcgcgggtctcggcccgtgctcctcgcgcgccgcgacggcgccggcggggcgacccg
ccgccgccggatcccacccggctcctcctcgccgacgccgtgcgggccctgtcggtctac
cggggcccgagctgggaggcgacggagctcgagctcgtctcctccgcgctcggcgaggga
cgctcgggagggcccctccacgaggtgctcgccaccgtccccctgggctga
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