Brachybacterium faecium: Bfae_17970
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Entry
Bfae_17970 CDS
T00965
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bfa
Brachybacterium faecium
Pathway
bfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bfae_17970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfa03019
]
Bfae_17970
03400 DNA repair and recombination proteins [BR:
bfa03400
]
Bfae_17970
Enzymes [BR:
bfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bfae_17970
Messenger RNA biogenesis [BR:
bfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bfae_17970
DNA repair and recombination proteins [BR:
bfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bfae_17970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HHH
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
ACU85617
UniProt:
C7MDG0
LinkDB
All DBs
Position
2017312..2019207
Genome browser
AA seq
631 aa
AA seq
DB search
MSIPPAADQISARREGDAGQADRALEILSSVFGYDSFRGDQRAIIEQVAAGGDAVVLMPT
GGGKSLCYQIPALLREGTGIVVSPLIALMADQVAALEGVGIRAAYLNSTLELDEARAVEQ
QLLAGELDLLYMAPERLVLPRTQDLLRRAHLALFAIDEAHCVSQWGHDFRPDYLGLSVLA
EAFPTVPRIALTATATEATHRELTERLQMQEAEHFVSSFDRPNIQYRIEPKASPREQLLR
LITTEHEGESGIVYCLSRKSVEQTAEALVARGIPALPYHAGLDAAVRQDHQERFLRAEGL
IIVATIAFGMGIDKPDVRFVAHLDLPKSIEGYYQETGRAGRDGQPSTAWMAYGLGDVVSQ
RKFIDTGEGSEQFKRNARSHLDAMLALCETVSCRRVQLLRYFGQDTEFTSCGNCDTCLSP
PQTWDATVAAQKLLSALIRLDRERGQKFGSGQVIEVLLGRENTRSTQSRHHELSVWGIGE
ELSEKEWRTAIRQLLARGIVEAEGDYGVLIPGPQAGPVLRGESTVELAVDRAPQRSSRSG
GRRAAGASRAAESLEPAQRERFEALRAWRTAVAKEKQIPPYMVFSDATLVGIVEARPASV
AQLGAVSGVGAKKLAEYGEAVLEALPDAPTG
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcccgcctgccgccgatcagatctccgcacgtcgcgagggtgacgccgggcag
gcggaccgggcgctcgagatcctctccagcgtcttcggctatgactccttccgcggcgat
cagcgcgcgatcatcgagcaggtcgccgccggcggcgacgccgtggtgctgatgcccacc
ggcggcggcaagtcgctgtgctaccagatccccgcgctgctgcgcgagggcaccgggatc
gtggtctcgccgctgatcgcgctgatggcggaccaggtcgcggcgctcgagggcgtgggg
atccgcgccgcctacctcaactccacgctcgagctcgacgaggcccgcgccgtcgagcag
cagctgctggccggcgagctcgacctgctgtacatggcacccgagcggctggtgctcccc
cgcacccaggatctgctgcgccgcgcccacctggcgctgttcgcgatcgacgaggcgcac
tgcgtctcccagtgggggcacgacttccgccccgactacctcgggctgtccgtcctggcc
gaggcgttcccgacggtgccgcggatcgcgctgacggccaccgcgaccgaggccacccat
cgcgagctcaccgagcggctgcagatgcaggaggcggagcatttcgtctccagcttcgac
cggcccaacatccagtaccggatcgagcccaaggcctcgccgcgcgagcagctgctgcgg
ctgatcaccaccgagcacgagggcgagtccgggatcgtgtactgcctctcgcgcaagagc
gtcgagcagacggcggaggcgctcgtggcccgcggcatccccgccctgccctatcacgcg
ggtctcgacgcggccgtgcggcaggatcaccaggagcggttcctgcgcgccgagggcctg
atcatcgtggcgaccatcgctttcgggatggggatcgacaagccggacgtccgcttcgtc
gcgcatctcgacctgcccaagtccatcgagggctattaccaggagaccggccgtgcgggc
cgtgacgggcagccctcgaccgcctggatggcctacggcctcggcgatgtggtgagccag
cggaagttcatcgacaccggcgagggctccgagcagttcaagcgcaatgcccgctcccat
ctcgacgcgatgctcgccctgtgcgagacggtctcctgccgccgggtgcagctgctgcgc
tacttcggccaggacacggagttcacctcctgcggcaactgcgacacctgcctgtccccg
ccgcagacctgggatgcgaccgtcgcggcgcagaagctcctctcggcgctgatccgtctg
gaccgcgagcggggccagaagttcggctccggccaggtgatcgaggtgctgctgggccgg
gagaacacccgctccacccagtcgcgtcatcatgagctgagcgtgtggggcatcggcgag
gagctctccgagaaggagtggcgcaccgcgatccggcagctgctggcccgcggcatcgtg
gaggccgagggcgattacggcgtgctgatccccgggccgcaggccgggccggtgctgcgt
ggggagagcaccgtcgagctggccgtggaccgcgccccgcagcgttcctcccgctcgggc
ggccgacgggccgcgggcgcctcccgcgccgcggagagcctcgagcccgcccagcgggag
cgtttcgaggccctgcgcgcctggcgcaccgccgtcgcgaaggagaagcagatcccgccg
tacatggtgttctcggacgccacgctggtggggatcgtcgaggcccgcccggcaagcgtc
gcgcagctcggcgcggtcagcggcgtcggtgcgaagaagctcgccgaatacggcgaggcc
gtgctcgaagcgttaccggatgcgccgaccgggtga
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