Brachybacterium faecium: Bfae_18350
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Entry
Bfae_18350 CDS
T00965
Name
(GenBank) formamidopyrimidine-DNA glycosylase Fpg
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bfa
Brachybacterium faecium
Pathway
bfa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bfae_18350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfa03400
]
Bfae_18350
Enzymes [BR:
bfa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Bfae_18350
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Bfae_18350
DNA repair and recombination proteins [BR:
bfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bfae_18350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_Tnp_IS91
Zn_ribbon_TFIIB
DUF5817
Motif
Other DBs
NCBI-ProteinID:
ACU85654
UniProt:
C7MDJ7
LinkDB
All DBs
Position
complement(2057331..2058272)
Genome browser
AA seq
313 aa
AA seq
DB search
MPELPEVEVVRRGLAPRTLGRTITDVELLDARIIRRQAGGADRLRAALEGSALTAVARRG
KFLWWRLADPDGADTGEALMGHLGMSGQLRFATPGAPAAAPSAASEGPASDPLRHRRLSL
HLDDGARLDLVDQRLFGGLWTSPLVEAADGSLAAVGSPDALLPEGAAHIARDLLDPAADL
PAIARALRTRRSAVKTLLLNQEIVSGIGNIYADEALWAARTRYDTPGTALSQRRALGILR
AARAVMERALEVGGTSFDALYVNVDGRSGYFARSLAAYGREGEPCTRCGRLLRRVVHQGR
SSHYCPRCQRRTT
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaggtcgaggtggtccggcgcggcctcgcgccccgcaccctcggc
cgcacgatcacggatgtcgagctgctcgacgcccgcatcatccgccgccaggccggggga
gcggaccggttgcgcgccgcgctcgagggcagcgccctcacggccgtcgcccgtcgcggc
aagttcctgtggtggcggctggccgatcccgacggcgcggacaccggcgaagcgctgatg
ggccacctcgggatgagcggccagctgcggttcgcgaccccgggagcccccgccgccgcc
ccgtcggccgcctccgaggggcccgcctccgatccgctgcgccaccgccgtctctccctc
cacctcgacgacggcgcgcgcctggacctggtcgaccagcgcctcttcggcgggttgtgg
acgagcccgctggtcgaagcggccgacggctctctcgccgcggtgggcagccccgacgcg
ctgctgcccgagggcgccgcccacatcgcccgcgatctgctcgacccggccgcggacctg
cccgccatcgcccgcgcgctgcgcacccgccgcagcgccgtgaagaccctgctgctgaac
caggagatcgtctccgggatcgggaacatctacgccgacgaggcgctgtgggcggcccgc
acccgctacgacacccccggcaccgcgctcagccagcgccgagccctcggaatcctccgc
gccgcgcgggcggtgatggagcgggcgctcgaggtgggcggcaccagcttcgacgcgctg
tacgtgaacgtcgacgggcgcagcggctacttcgcccgctccctggcggcgtacgggcgg
gagggtgagccgtgcacccggtgcggtagattgcttcgtcgggtggtccatcagggccga
agcagccattactgcccccgatgccagcgcaggacgacgtga
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