Brachybacterium faecium: Bfae_19310
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Entry
Bfae_19310 CDS
T00965
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bfa
Brachybacterium faecium
Pathway
bfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bfae_19310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfa03021
]
Bfae_19310
03019 Messenger RNA biogenesis [BR:
bfa03019
]
Bfae_19310
Transcription machinery [BR:
bfa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Bfae_19310
Messenger RNA biogenesis [BR:
bfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bfae_19310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
ResIII
NACHT
Motif
Other DBs
NCBI-ProteinID:
ACU85747
UniProt:
C7MDU0
LinkDB
All DBs
Position
complement(2166557..2168698)
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AA seq
713 aa
AA seq
DB search
MNDTTSGADLAAKKLPELQAIASELGIKGARRLRKGELIEAIRGGSAPSAAPAAASDTSA
GAEASAQNEAPTRRARSRTAPAEQSAPAAQDAPAEQSADRSAPADAAAPADEDRRRSRSR
SRSGDTEAAPDLGIELPVGGSRDGGSTGGEESGRENAPRENGGRSRRQDGRRSGDDESGR
EQHRGSGEGEDRRGDRRADQDRGGQQRDERGRGQQNRDQQNRDQSRDQPGRGEGRGGRRR
LEDIELPDRSGEQDDDRQGGDGYDDDRRGRSRSRNRSRDRKRRGRGGQNDGQGPQGGQQG
GQHDDNEVRDGDELMTIAGILDIRDNNAYVRTTGYLPGPSDVYVTMNQVKRAGLRKGDAI
TGQVKAPRDGEDHQVEQQHHHGGGRNRRGKGGNQNKYAALVQVDTVNGMPPERSRQRVDF
GKLTPLYPEERLRLETAPNAVAPRVIDLVSPIGKGQRGLIVAPPKAGKTIIMQQIANAIT
TNNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPASDHTIVAELAIERAKRLVEM
GRDVVVLLDSLTRLSRAYNLAAPASGRILSGGVDASALYPPKRFFGAARNIEHGGSLTIL
ASALVETGSKMDEVIFEEFKGTGNMELRLSRHLADKRIFPAVDVNASGTRREEVLMGKEE
LAIMWKLRRVLGALEQQQALEMLMERIKKTQSNPEFLMTVQKNTPSVTGRSGD
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacaccacctccggcgcagacctcgcggcgaagaagctccccgagctgcaggcc
atcgcgtccgaactcggcatcaagggagcccgtcgcctccgcaagggcgagctgatcgag
gcgatccgcgggggctccgcgccctcggccgccccggccgccgcctccgacacctccgcg
ggggcggaggcctcggcgcagaacgaggcgccgacccgtcgggcccggtcgcgcaccgca
cccgccgagcagagcgcgcccgccgcacaggacgctccggccgagcagtccgccgaccgc
tccgcacccgcggacgccgccgctcccgccgatgaggaccgccgccgttcgcgctcgcgc
tcccgcagcggggacaccgaggccgcgcccgatctcggcatcgagctgcccgtcggcggc
tcccgcgacggcggcagcaccgggggcgaggagtccggccgtgagaacgcgcctcgtgag
aacggaggccgcagccgccgccaggacggtcgacgctccggcgacgacgagtccggccgc
gagcagcaccgcggctccggcgagggcgaggaccggcgcggcgatcgccgtgcggaccag
gatcgcggcgggcagcagcgcgatgagcggggccgcgggcagcagaaccgtgaccagcag
aaccgcgatcagagccgcgatcagcccggccgcggcgagggccggggcgggcgccgtcgc
ctcgaggacatcgagctgccggaccgttcgggcgagcaggacgacgatcgccagggcggc
gacggctacgacgacgaccgtcgcggccgctcccgcagccgcaaccgctcgcgggaccgc
aagcgccgcggccgtggtggtcagaacgacggtcagggcccgcagggcggccagcagggt
ggccagcacgacgacaacgaggtgcgcgacggcgacgagctgatgaccatcgccggcatc
ctcgacatccgcgacaacaacgcctacgtgcgcaccacgggctacctgcccggccccagc
gacgtctacgtcaccatgaaccaggtcaagcgggctggtctgcgcaagggcgatgcgatc
accggccaggtcaaggcccctcgtgacggggaggaccaccaggtcgagcagcagcaccac
cacggcggcggacgcaaccggcgcggcaagggcggcaaccagaacaagtacgccgccctg
gtgcaggtcgacaccgtcaacggcatgcccccggagcgctcccgccagcgggtcgacttc
ggcaagctcaccccgctgtacccggaggagcgcctccgcctggagaccgcgcccaacgcc
gtcgcgccccgcgtgatcgacctcgtctcgccgatcggcaagggccagcgcggcctcatc
gtcgcgcccccgaaggccggcaagacgatcatcatgcagcagatcgcgaacgcgatcacc
accaacaaccccgaggtccacctcatggtcgtgctcgtcgacgagcgccccgaggaggtc
accgacatgcagcggacggtcaagggagaggtcatcgcctcgaccttcgaccgccccgcc
tcggatcacacgatcgtcgccgagctcgcgatcgagcgcgccaagcgcctggtggagatg
ggccgcgacgtggtggtgctgctggactcgctcacccgcctgtcccgcgcctacaacctt
gccgcaccggcctccggccgcatcctctccggcggtgtggacgcctcggcgctgtacccg
cccaagcggttcttcggcgcggcccgcaacatcgagcacggcggctccctgacgatcctc
gcctcggcgctggtggagaccggctccaagatggacgaggtgatcttcgaggagttcaag
ggcaccggcaacatggagctgcggctctcgcgccatctcgccgacaagcgcatcttcccg
gcggtggacgtcaacgcctcgggcacgcgccgcgaggaggtgctcatgggcaaggaggag
ctggccatcatgtggaagctccgccgggtgctcggcgccctcgagcagcagcaggcgctc
gagatgctcatggagcgcatcaagaagacccagtcgaaccccgagttcctcatgacggtc
cagaagaacacgcccagcgtgaccggacgcagcggcgactga
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