Brachybacterium faecium: Bfae_20230
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Entry
Bfae_20230 CDS
T00965
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
bfa
Brachybacterium faecium
Brite
KEGG Orthology (KO) [BR:
bfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfa03019
]
Bfae_20230
Enzymes [BR:
bfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Bfae_20230
Messenger RNA biogenesis [BR:
bfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Bfae_20230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
nSTAND3
FtsK_SpoIIIE
WHD_HA2
T2SSE
ABC_tran
SLFN-g3_helicase
AAA_11
TrwB_AAD_bind
AAA_23
Vint
SRP54
Motif
Other DBs
NCBI-ProteinID:
ACU85831
UniProt:
C7ME24
LinkDB
All DBs
Position
complement(2262977..2266870)
Genome browser
AA seq
1297 aa
AA seq
DB search
MTTPSSTSDPAPPTTPGPRLTYPGDLPVSQRREDIQAAITEHQVVVIAGATGSGKTTQIP
KMLLELGYGQGGKLIGHTQPRRIAARSVAQRIAGEMGEKLGEGTVGYQVRFTRETSRGTR
LKLMTDGILLAEIGRDRLLKRYDAIIIDEAHERSLNIDVILGYLRQILPQRPDLKIIITS
ATIDPERFAEHFAKVLPSGERRPAPIIEVSGRTYPVEIRYRPLVLEPEMEDDDELEDVHS
IERDLTQAIIDAVDELSAEGPGDMLVFLPGEREIREISEALTTHLSRGTRGRGALPVEVL
PLFGRLSAQDQQKIFSPPKAGTYRRVILSTNVAETSLTVPGITYVIDSGLARISRYSQRT
KVQRLPIEPISQASADQRSGRSGRTAPGIAIRLYSQEDFEGRPEFTEPEILRTSLASVVL
LMTSLGLGDVEAFPFVEPPANRAITDGVRLLDELGAIEDAPGEPGGRRLTRIGRSLARFP
LDPRMARMLIEADRLGALREVLVIVAGLSIQDPRERPLGQEQQAKEKHKRFEDETSDFLA
FLNLWNHLRQRRKELSSSAFRREVRAEHLHYLRIREWWDLHAQLRDMAKDAGLSRNDNDA
SPQAIHQSLLAGLLSHVGLLDDRTREYAGARGARFALWPGSALAKKRPDYVMVAELVETS
RLWGRTAARIDPAWAEETGAHVVKRSHSAPHWSSKRASAMARQKVTLYGVPLVADRVVGY
GRIDPEAAREIFLQHALIEGDWRTRHHFFRDNRALIQELEELEAKTRRRDLLISDEQLFR
FYDERIPRTVVSGRHFDSWWKTQRHETPDLLTLTEKDLLAADESVAEAIAADFPDSWVQG
DITLPLSYAFGEVGAKGADGVTATVPLAVLNRLQARGFDWLVPGMREELVTELIRSLPKP
IRRHLVPAPERAKAVATTLHDDDPDTGEPFLEAVADELVALPGVPDDLPLYGPEFDVAKL
PAHLRMHFRVVDDKGRQIGTGDDLEALKGTLKERVDASVSSQADSLARTDLPAFPDEGVP
AVHESTVGGLKVTGYPALVARRGEDGRLQRVDLAVLATADEQALAHREGVIALLDRDLGA
DLAAVLNALPTPTKLAAASSDYASTAALLADASRAATVHLAGTAEVRTKAQYDALLDRVR
RQHDALAAQAVKDAAAALAVSGTLHKALSRVPSLAVLSHLTQIREHAASLLGDGFISRTG
IEHLPDLRRYLEADAIRLEKLPSNPRRDEQLAWQIGDLEQYWAARKAKLSARRRAEADVR
EIDWLLEELRVSLFAQTLGTKQTVSDKRIRKAIAEIA
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgccctcctcgacgtccgatccggccccgcccacgacccccggcccgcgcctc
acctatccgggagacctgcccgtctcgcagcgccgcgaggacatccaggccgcgatcacc
gagcaccaggtggtggtgatcgcgggcgccaccggctcgggcaagaccacccagatcccg
aagatgctgctcgaactgggatacgggcagggcgggaagctcatcggccacacccagccg
cgccgcatcgcggcccgctccgtcgcgcagcgcatcgccggcgagatgggcgagaagctg
ggggaggggaccgtcggctaccaggtgcggttcaccagggagaccagccgcggcacccgc
ctgaagctcatgaccgacggcatcctcctggcggagatcggccgcgaccggctgctgaag
cgctacgacgcgatcatcatcgacgaggcgcacgagcggtccctgaacatcgacgtgatc
ctcggctacctgcgccagatcctcccgcagcgcccggacctcaagatcatcatcacctcc
gccaccatcgatcccgagcgcttcgcggagcacttcgcgaaggtgctgccctcgggcgag
cggcggccggcaccgatcatcgaggtctccggccgcacctacccggtcgagatccgctac
cgcccgctcgtgctcgaacccgagatggaggacgacgacgagctcgaggacgtccactcg
atcgagcgcgacctcacccaggcgatcatcgacgccgtcgacgagctgtccgccgaaggg
cccggggacatgctcgtcttcctccccggggagcgggagatccgcgagatctccgaggcg
ctgaccacccacctgagccgcggcacgcggggtcgcggcgcgctgccggtcgaggtgctg
ccgctgttcgggcggctgtccgcacaggaccagcagaagatcttctccccgccgaaggcc
ggcacgtaccgccgcgtcatcctgtccacgaacgtggccgagacctccctgaccgtcccc
ggcatcacctacgtcatcgactcgggcctggcccgcatctcccgctactcgcagcgcacg
aaggtgcagcgcctgccgatcgagccgatctcccaggccagcgccgaccagcgctccggc
cgctccggtcgcaccgcccccggcatcgcgatccgcctgtactcgcaggaggacttcgag
ggccggccggagttcaccgagccggagatcctgcgcacctccctcgcttcggtggtgctg
ctgatgacctcgctgggcctgggggacgtggaggccttccccttcgtcgaaccgcccgcg
aaccgggcgatcaccgacggggtgcggctgctggacgagctgggggcgatcgaggacgcc
ccgggagagcccggcgggcggcgtctgacccgcatcggccgctccctcgcccgcttcccg
ctggacccgcggatggcgcgcatgctcatcgaggcggatcggctcggggcgctgcgggag
gtgctggtcatcgtcgccggcctgtcgatccaggatccgcgcgagcggccgctgggccag
gagcagcaggccaaggagaagcacaagcgcttcgaggacgagaccagcgacttcctcgcc
ttcctgaacctgtggaaccacctgcggcagcggcgcaaggagctctcctcctccgcgttc
cgccgcgaggtgcgcgccgagcacctgcactacctgcggatccgcgaatggtgggacctg
cacgcccagctgcgcgacatggccaaggatgcgggcctgtcccgcaacgacaacgacgcc
tccccgcaggcgatccaccagtctctgctggccgggctgctcagccacgtcggcctgctc
gatgaccgcacccgcgagtacgccggtgcgcgcggcgcccgcttcgcgctctggcccggc
tcggcgctggccaagaagcgccccgactacgtgatggtcgccgagctggtggagacctcc
cggctgtgggggcgcaccgcggcccgcatcgatccggcctgggcggaggagaccggcgcg
cacgtggtcaagcgctcccactccgccccgcactggtcctcgaagcgggcctccgcgatg
gcgcgccagaaggtgacgctgtacggggtgccactggtggccgatcgcgtggtcggctac
gggcgcatcgacccggaggcggcgcgcgagatcttcctccagcacgcgctgatcgagggg
gactggcgcacccgccaccacttcttccgcgacaaccgcgccctgatccaggagctcgag
gagctggaggccaagactcgccgccgcgatctgctgatctccgacgagcagctgttccgc
ttctacgacgagcggatcccgcgcaccgtggtctccggacgccacttcgacagctggtgg
aagacccagcgccacgagacgccggacctgctcaccctcaccgagaaggacctcctggcc
gccgacgaatccgtcgccgaggccatcgccgcggacttccccgacagctgggtgcagggc
gacatcaccctgccgctgagctacgccttcggcgaggtgggggcgaagggggccgacggc
gtcaccgcgaccgtgccgctcgcggtgctcaaccgcctccaggcgcgcggcttcgactgg
ctggtgcccggcatgcgcgaggagctggtcaccgagctgatccgttcgctgcccaagccg
atccgccgccacctggtccccgcccccgaacgggccaaggccgtcgccacgaccctccac
gacgacgacccggacaccggcgagcccttcctcgaggcggtggccgacgagctcgtcgcc
ctgcccggcgtgccggacgacctgccgctgtacgggccggagttcgacgtcgcgaagctg
cccgcccatctgcggatgcatttccgcgtggtcgatgacaagggccgccagatcggcacc
ggcgacgacctcgaggcgctgaagggcacgctgaaggagcgggtggacgcctcggtctcc
tcgcaggccgattccctcgcccgcaccgacctgcccgccttccccgacgagggcgtgccg
gctgtccacgagtccacggtcggcgggctgaaggtcaccggctacccggccctggtggcg
cgccgcggcgaggacggccggctgcagcgcgtggacctcgccgtgctcgccaccgccgat
gaacaggcgctcgcccaccgcgagggcgtgatcgccctgctggaccgcgacctcggcgcc
gatctggccgcggtgctcaacgccctgcccaccccgaccaagctcgccgccgcgagctcg
gactacgcctccaccgcggcgctgctggccgacgcctcgcgcgccgcgaccgtgcacctg
gccggcaccgccgaggtgcgcacgaaggcgcagtacgacgccctcctggaccgcgtgcgc
cggcagcacgacgcgctcgccgcgcaggcggtcaaggatgccgcggccgcgctcgccgtc
tccggcacgctgcacaaggcgctctcgcgcgtgccctccctcgcggtgctctcccacctg
acccagatccgcgagcacgcggcctcgctgctgggggacgggttcatctcccgcaccggc
atcgagcacctgccggacctgcggcgctacctcgaggccgatgcgatccggctcgagaag
ctgccctccaacccgcgccgggacgagcagctcgcctggcagatcggggacctcgagcag
tactgggcggcgcggaaggcgaagctctccgcccggcgccgggcggaggcggacgtgcgc
gagatcgactggctgctcgaggagctgcgggtgagcctgttcgcccagacgctcggcacg
aagcagaccgtgtccgacaagcggatccggaaggcgatcgccgagatcgcctga
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