Candidatus Borrelia fainii: BOFE_00290
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Entry
BOFE_00290 CDS
T09149
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bfai
Candidatus Borrelia fainii
Brite
KEGG Orthology (KO) [BR:
bfai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfai03032
]
BOFE_00290 (topA)
03400 DNA repair and recombination proteins [BR:
bfai03400
]
BOFE_00290 (topA)
Enzymes [BR:
bfai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BOFE_00290 (topA)
DNA replication proteins [BR:
bfai03032
]
Prokaryotic type
DNA Topoisomerases
BOFE_00290 (topA)
DNA repair and recombination proteins [BR:
bfai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BOFE_00290 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_C_rpt
Toprim_4
Toprim_2
ECR1_N_2
Motif
Other DBs
NCBI-ProteinID:
BDU62489
LinkDB
All DBs
Position
38572..41109
Genome browser
AA seq
845 aa
AA seq
DB search
MQQRKLIIVESPTKAITIKKYLDNSFLVEACIGHIRDLPNSAKEIPEEYKKFEWATISID
HQNDFKPLYIIPNNKKTVIEKLKNLIKEKDEIYLATDQDREGETIAFHLKEVLQIKNYKR
MVFHEITKSAIIDSLNNTREINMNLVNAGETRRILDRLYGYTISPLLWKKIAYGLSAGRV
QSVGLQLIIEKEMTRINFKKANYYSITLECKHNKNDIQIKTILEKIKNKNVAESKDFVND
TGNLHDPEKTIVIDKTLMNMLTKELNNTKEIEVISIETKEIKQAPPKPFITSSLQQEVNR
RLKIGTKQIMNYAQKLYENGYITYIRTDSYNIAKTAREKIKTIIKEKYGEEYIETNDRLY
AKAKMAQDAHEAIRPSELFTSPEQIQIESETARKIYKIIWDRTIESVMKDAIKKIIKITL
KYETLTFKTSFTTIIFDGFLKNSKESYENSIIDFSLIKEGDKFVILDVKPEEHETKPPLR
YTEASLVQKLEKEGIGRPSTYSTIISTLFEREYIFEYNNTLIPTIKGAAVINLLKKYFPV
LIELKFTSHMEENLDKIAIGALDKIKYLNKFYNGEEGLKNTINKIEPIISPEEFRIVHEY
TNNEKFSYKVNIGKFGPYLIFNGNNYAINVTTPLENLYKEDDIKKIISEKEIQPNILGID
PETGLNVIYKNSKYGGIVQLGEDIHAPQEFTKTGKPKKPKIIKAKKMSTKNIEHENITLE
LALKLLSLPKIIGEYPKTHEKIIATTGIFGDYIKTENNSIICPLKKDTKAYEITLEESIK
LLDAKLEKNGIIVKTIPLAKNKVGNKIYVYKQNDKFYAKIKRKKVDLPTDIDLNQIDATY
IFGLM
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaagaaaattaataatagtagaatcaccaacaaaagcaataacaataaagaaa
tatcttgataactcattcttagtagaagcatgcataggacatataagagatttgccaaac
agtgctaaagaaatacctgaagagtacaaaaaatttgaatgggcaactatctctatagat
catcaaaatgactttaaaccgctctacattatcccaaacaataaaaaaacagtaattgaa
aaactcaaaaacctcataaaagaaaaagacgaaatctatcttgccactgaccaagataga
gaaggtgaaacaatagcattccatttaaaagaagtattacaaattaaaaattataaaaga
atggtatttcatgaaattacaaaaagtgcaataatcgattcactaaataatacaagagaa
attaacatgaatctcgttaatgccggagagacaagaagaatactagatagactttatgga
tatactatctctcctctactttggaaaaaaattgcttacggactctctgccgggagagta
caatccgttggccttcaattaataatagaaaaagaaatgacaagaataaattttaagaaa
gccaattattattccattacgcttgaatgcaaacacaacaaaaatgacatacagattaaa
acaatacttgaaaaaattaaaaacaaaaatgtagctgagagcaaagactttgtaaacgac
acagggaatctacacgatcctgaaaaaacgattgtaatagacaaaacattaatgaatatg
cttacaaaggagttaaataacacaaaagagatagaggtgatttcaattgaaacaaaagaa
ataaaacaagcgcctcctaaaccattcatcacatcttctcttcaacaagaagtaaacaga
cgattaaaaataggaaccaaacaaattatgaattacgcacaaaaactatatgagaacggc
tacataacttacataagaacagattcttataacattgccaaaaccgcaagagaaaaaata
aaaactattataaaagaaaaatatggtgaagaatatatagaaacaaatgacagattatat
gccaaagctaaaatggctcaagatgcacatgaagctataagaccttctgaactctttact
tctcctgaacaaatacaaatagaaagcgaaactgccagaaaaatatataaaataatatgg
gatagaactattgaatccgtaatgaaagacgcaataaaaaaaattattaaaataacattg
aagtatgaaactttaacctttaaaacaagtttcacaacaatcatctttgatggctttcta
aaaaacagtaaagagtcttatgaaaacagtatcatagatttttcccttataaaagaaggt
gataaatttgtcatcttagatgtaaaaccagaagagcatgagacaaaacctccacttaga
tatacagaagcatcacttgtacaaaagcttgaaaaggaaggtataggacgtccttcaact
tattcaactattatctcaacactctttgaaagagaatatatatttgaatataataacaca
ctaattccaacaataaaaggagctgctgtcataaatctcttaaaaaaatatttcccagta
ttaattgaactaaaatttacatctcacatggaagaaaacctagataagatcgcaataggc
gcattagacaaaataaaatatctaaataaattttataatggagaagaaggtcttaagaat
actataaataaaatagaacccattattagccctgaagaatttagaatagttcatgaatat
actaataacgaaaaatttagttataaagttaatattggcaagtttggtccctatttaatt
tttaatggaaataattatgcgattaatgtaacaacaccattagaaaacttatacaaagaa
gatgatataaaaaaaataatatcagaaaaagaaatacaacccaatatattaggaattgat
cctgaaacaggacttaatgtgatatataaaaactcaaaatatggaggaattgtccaactt
ggagaggatattcatgctccacaagaattcacaaaaacaggtaaaccaaaaaaacctaaa
ataataaaagctaaaaaaatgtcaacaaaaaatatagaacatgaaaatataaccctagaa
cttgctctcaaattactctcacttccaaaaataattggcgaatatccaaaaactcatgaa
aaaataattgctacaacagggatttttggagactatattaaaactgaaaacaacagcata
atatgcccattaaaaaaagacacaaaagcatacgaaataacactagaagaatcaattaaa
ctgctagacgcaaaactagaaaaaaacggaattattgtaaaaacaataccactagcaaaa
aataaagttggaaataaaatttatgtttacaaacaaaatgataaattttatgctaaaatt
aagaggaaaaaggttgatttgcctactgatatcgaccttaatcaaatagatgcaacttat
atttttggactaatgtag
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