Candidatus Borrelia fainii: BOFE_02400
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Entry
BOFE_02400 CDS
T09149
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bfai
Candidatus Borrelia fainii
Pathway
bfai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BOFE_02400 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfai03400
]
BOFE_02400 (recD)
Enzymes [BR:
bfai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BOFE_02400 (recD)
DNA repair and recombination proteins [BR:
bfai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BOFE_02400 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_11
PIF1
Helicase_RecD
AAA_22
SLFN-g3_helicase
PhoH
RsgA_GTPase
DEAD
AAA_5
NPHP3_N
T2SSE
RNA_helicase
AAA
AAA_16
Zeta_toxin
AAA_28
TsaE
Flavi_DEAD
FtsJ
DUF3511
CobA_CobO_BtuR
Motif
Other DBs
NCBI-ProteinID:
BDU62700
LinkDB
All DBs
Position
283882..285708
Genome browser
AA seq
608 aa
AA seq
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MRNFLVLREFLKDHKRNYLNPELKIYEIIETLNINIENYYKAHLLTKKIKDEKYEEITMF
LIFLFNYFSKGHLRANINLLIKDIQNTINCAFLGIENKDQFYQKSINILEELEKLTQATK
IHKIILHLKENNIMKDFNQNERIITPLILENNIHIYTQKNFREEEELIKKIEQRLKDNKS
EITIQRIQNIMNNLNTKDLSEEQINSIKKSLKNNFFILSGGPGTGKTTTINYILKAIDMH
LNVKQKVALVAPTGKASQKLKSSLKESFKNLKIEYSTVQKLLKMSFINKSNKYDEANPLE
FEIIIIDEASMIDSSTFLKLLKAIKTSTKLIITGDKNQLPSIAGGNVYSSLTQIKEISDE
NVEILKKNFRSNDEIHSLTKAIYQEDINLIDIQLNANKNIILKDINKVNIENELLNYTKD
LYKNISNFDLNSLNNKEIESIINALLNNVILCSKNFGKFGTKIINEIIKSHLKKINGNLL
GQIILITQNDYKNDLFNGEKGILFRENSKIYALFKREDEKYKRINFNLINKYELSFATTI
HKSQGSEYQHVQIIIEDHSFLTKELLYTAITRAKESIKIISSKDIIKNVILKTIKRDSKI
SDHIDALK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattttttagtcttaagagaatttttaaaagatcacaaaagaaactatttgaat
ccagaactcaaaatttatgaaataatagaaactttaaacataaacatagaaaattactac
aaagcacatttactcacaaaaaaaatcaaagatgaaaagtatgaagaaattactatgttt
ttaatatttttatttaattatttctctaaaggacatttaagagctaatattaatttatta
atcaaagatattcaaaatacaatcaactgtgctttccttggaatagaaaacaaagatcaa
ttttaccaaaaatcaatcaacatactagaagaacttgaaaagcttacacaagcaacaaaa
atacacaaaataatcttacatttaaaagaaaataatataatgaaagattttaatcaaaat
gaaagaatcataactcctttaatattagaaaataatattcacatctatactcaaaaaaac
tttagagaagaagaagaactaataaaaaaaatagagcaaagacttaaggataacaaaagt
gaaataactattcaaagaatacaaaatatcatgaacaatttaaacactaaggacctaagt
gaagaacaaatcaattcaatcaaaaaatctttaaaaaataatttctttatactcagtggt
ggtccaggcacaggcaaaacaacaactataaattatattttaaaagcaattgatatgcac
ttaaatgtcaaacaaaaggtagcccttgtagcaccaactggaaaagcaagtcaaaaacta
aaatcaagtttaaaagaatcatttaaaaatcttaaaatagaatacagcacagtacaaaaa
ttattaaaaatgtcatttatcaataaaagtaataaatatgatgaagccaaccccctagaa
tttgaaataataataattgatgaagcatctatgatagattcaagcactttcttaaaattg
ttaaaggcaatcaagacaagcacaaaactcataataacaggggacaaaaaccaacttcca
tcaatagctggaggcaatgtatattcaagtctgacacaaataaaagaaataagtgatgaa
aatgtagaaatacttaaaaagaatttcagaagtaacgatgagatacattcattaaccaaa
gcaatatatcaagaagacataaatctaattgatattcaacttaatgccaacaaaaatata
attttaaaggatataaataaagtcaatattgaaaatgaattattaaattacacaaaagat
ttatataaaaatatctctaattttgatctcaattcactaaacaacaaagaaattgaatca
ataattaatgctttacttaacaatgttattttatgctcaaaaaattttggaaaatttgga
acaaaaataataaatgaaataataaaatcacatttgaaaaaaatcaatggcaatttactt
ggacaaataattttaattactcaaaatgattataaaaacgatctatttaatggagaaaag
ggtattctctttagagaaaactctaaaatttacgctttatttaaaagagaagatgaaaaa
tacaaaagaataaactttaatttaataaacaaatatgaacttagttttgcaacaacaata
cataaaagccaaggctctgaatatcaacatgtacaaataatcatagaagatcactcattt
ttaacaaaagaactactctacactgcaataacaagagctaaggaaagcataaaaataata
tcaagcaaagatatcattaaaaatgtcatcctaaaaacaataaagagagattcaaaaatc
tcagatcatatagatgcattaaaataa
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