Candidatus Borrelia fainii: BOFE_05170
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Entry
BOFE_05170 CDS
T09149
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bfai
Candidatus Borrelia fainii
Pathway
bfai03420
Nucleotide excision repair
bfai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BOFE_05170
03430 Mismatch repair
BOFE_05170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfai03400
]
BOFE_05170
Enzymes [BR:
bfai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BOFE_05170
DNA repair and recombination proteins [BR:
bfai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BOFE_05170
MMR (mismatch excision repair)
Other MMR factors
BOFE_05170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_11
AAA_30
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
BDU62977
LinkDB
All DBs
Position
597105..599198
Genome browser
AA seq
697 aa
AA seq
DB search
MDKIEKFFFSLNSYQKQIVLDDTKNPILVLAGPGSGKTRVITAKITHLIKKMQLKPEEIL
ALTFTNKAANEMNLRLNYLFDFNKALHIQTFHSFGAWLLRLYFKEFDKNYDSNFTIWDTN
DVVKFIKQIGLASTIELSKYVASLIFKYKENCFLDNYCGIDEKSYKDIKFYEQEKSKNNA
FDFADLILKTVLMLRNCKDIKMRVQKKFKAIFVDEYQDTNYTQFLFLKELYCKDMHFMVV
GDEDQSIYSFRGSRIENIFEFEKMFDNVSKYYLVQNYRSSLSIVNVANDVISKNRNRYEK
VITTENKMGKKIRFFVFQNPAEEAEYFSNFLIENKLETAILYRFNYQSLQFEKSFLKHNI
PHKILGSIRFYEREEIKDVISLLRLFVNKKDKISFLRVINKPARGIGKTTTNKIIAILND
RNVNFDLILASRKVAESLKGKAKDSLVTFLNLYDKLAENIQKDVYVNLSEFIKNVVIRSG
FWDYYQKFDEDEKSRNIDELISSGVEYSGSFEGLVIFLENSSISPLIHGDFNSSVLLSSI
HGVKGLEFNRVIISGLEKGLLPAEIEELTKERLEEERRLFYVAITRAKFELIVTINLQRF
FGGMLKNTAMSIFFQDISKDNYDIVFVPEYLKDNFKYFFSKNGNKSFNIGDYITYNGENG
IVVDKWYQNGEPFIKINLRNGKKAILSSSYIKGLAKI
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaatagaaaaatttttctttagtttaaattcttatcagaaacaaattgtttta
gatgatactaaaaatcccattcttgttttggcaggtccaggcagtggtaaaacaagggtt
ataacggctaaaataacacacttaataaaaaaaatgcaattaaaaccagaagagattctt
gctttaacatttacaaataaagctgcaaatgagatgaatttaagactaaattatcttttt
gattttaataaggctttgcatattcagacttttcattcttttggtgcttggcttttgaga
ctttattttaaagaatttgataaaaattatgattcaaattttacaatttgggatactaat
gatgttgttaaatttattaagcaaattgggcttgcttcaaccattgaactttcaaagtat
gttgcgtctctcatatttaaatataaggaaaattgctttttagataattattgtggtatt
gatgaaaaaagttacaaagatattaaattttatgagcaagaaaaatctaaaaataatgct
tttgattttgctgatcttattcttaaaaccgttttgatgttaagaaattgtaaagatata
aagatgagggttcagaaaaaatttaaggctatttttgtagatgagtatcaagataccaat
tatacacagtttttatttttaaaagagctttattgtaaagatatgcattttatggtagta
ggagatgaagatcagtctatttattcttttagaggctctagaattgaaaatatttttgaa
tttgaaaaaatgtttgacaatgtgtctaaatattatttggtacaaaattatcgttctagt
ttaagcattgttaatgttgcaaatgatgttatttcaaaaaatagaaatcgatatgaaaaa
gtaataactacagaaaataaaatgggcaagaagataagattttttgtttttcaaaatcct
gcggaagaggctgagtatttttctaatttccttattgaaaataagcttgagacagctatt
ctttatagatttaattaccagtccttgcagtttgagaaatcttttttaaaacataatatt
ccacataaaatattaggttcaattagattttatgaaagagaagagattaaagatgtaatt
tctttgttaagactttttgtaaataaaaaagataaaatttctttcttaagagtaataaat
aaacctgctagggggattggaaaaactactacgaataaaataattgcaatactcaatgat
cgtaatgttaattttgatttaattcttgcaagtagaaaagttgctgagagtcttaagggc
aaagcaaaagattctcttgttacttttttaaatctgtatgataaactagcagaaaatata
caaaaagatgtttatgtaaatttatctgaatttattaaaaatgttgtaattagatctgga
ttttgggattattatcaaaaatttgatgaggatgaaaaatctagaaatattgatgaactt
atcagcagtggagttgaatattcaggcagttttgagggacttgtaatatttttggaaaat
tcatctatttcacctttaatacatggagattttaactctagtgtactactctcttcaatt
catggggttaaaggacttgaatttaatagagtgataatatctggtcttgaaaagggttta
ttgcctgctgagatcgaagaattgactaaagagagactggaagaggagagaagacttttt
tatgttgctattactagagccaaatttgagcttattgtgacgattaatttgcaaagattt
tttggaggcatgctcaaaaatacagctatgtcaatcttttttcaagatattagcaaagat
aattatgatattgtttttgttccagaatatttaaaagataattttaaatattttttttca
aaaaatggtaataaaagctttaatattggagattatataacttataatggtgaaaacgga
atagttgttgataagtggtatcaaaatggtgagccatttattaaaattaatctgagaaat
ggtaaaaaagctattttaagttcaagttatattaaaggacttgccaaaatttag
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