Candidatus Borrelia fainii: BOFE_06310
Help
Entry
BOFE_06310 CDS
T09149
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K05788
integration host factor subunit beta
Organism
bfai
Candidatus Borrelia fainii
Brite
KEGG Orthology (KO) [BR:
bfai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfai03032
]
BOFE_06310 (hup)
03036 Chromosome and associated proteins [BR:
bfai03036
]
BOFE_06310 (hup)
03400 DNA repair and recombination proteins [BR:
bfai03400
]
BOFE_06310 (hup)
DNA replication proteins [BR:
bfai03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BOFE_06310 (hup)
Chromosome and associated proteins [BR:
bfai03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BOFE_06310 (hup)
DNA repair and recombination proteins [BR:
bfai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BOFE_06310 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BDU63091
LinkDB
All DBs
Position
715322..715648
Genome browser
AA seq
108 aa
AA seq
DB search
MSFSRRPKVTKSDIVNQISLNIKNSNEKLEKKYIRLVVDAFFEELKNNLCLNNVIEFRSF
GTFELRKRKGRQNARNPQTGEYVNVDDHHVAYFRPGKDLKERVWGIKG
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttcaagaagacccaaagttactaagtcagatattgttaaccaaatatcttta
aatattaaaaatagtaatgaaaaattagagaaaaaatatataaggcttgtagttgatgct
ttttttgaagagcttaaaaataatctttgtcttaataatgttatagagtttagatctttt
ggtacatttgagcttagaaaaagaaaaggtcgccaaaatgctcgtaatcctcaaacaggt
gaatatgttaatgttgatgatcatcatgttgcttattttcgtccaggaaaagatttaaaa
gaacgagtatggggcattaagggatag
DBGET
integrated database retrieval system
