Bacteroides fragilis BOB25: VU15_00080
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Entry
VU15_00080 CDS
T03897
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bfb
Bacteroides fragilis BOB25
Pathway
bfb03030
DNA replication
bfb03410
Base excision repair
bfb03420
Nucleotide excision repair
bfb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VU15_00080
03410 Base excision repair
VU15_00080
03420 Nucleotide excision repair
VU15_00080
03440 Homologous recombination
VU15_00080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfb03032
]
VU15_00080
03400 DNA repair and recombination proteins [BR:
bfb03400
]
VU15_00080
Enzymes [BR:
bfb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VU15_00080
DNA replication proteins [BR:
bfb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VU15_00080
DNA repair and recombination proteins [BR:
bfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VU15_00080
NER (nucleotide excision repair)
GGR (global genome repair) factors
VU15_00080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
AKA54025
UniProt:
A0A2M9UQQ8
LinkDB
All DBs
Position
complement(18869..21676)
Genome browser
AA seq
935 aa
AA seq
DB search
MNQNSKLFLLDAYALIYRAYYAFIKNPRINSKGFNTSAILGFVNTLEEVLKKENPTHIGV
AFDPPGPTFRHEAFEQYKAQREETPEAIRLSVPIIKDIIKAYRIPILEVAGYEADDVIGT
LATEAGNQGITTYMMTPDKDYGQLVTDHVFMYRPKYGDKEFEVMGVEQVKAKFDIQSPAQ
VIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAEFGSIENLLEHTDQLKGALKTKVETNREM
IIFSKFLATIKVDVPIRLDMNSLVREQADEDTLRKIFEELEFRTLMERIFKKESSPASPI
AGTLFNQENGPVQGNLFEEFTPDHTNEEKKSNLESLNSLSYDYQLIDTEEKRNEIIKKLL
TSEILALDTETTGTDPMDAELVGMSFSITENQAFYVPVPAEREEAIKIVREFEPVFKNEK
SLKVGQNIKYDMLVLQNYGIEVRGKLFDTMVAHYVLQPELRHNMDYLAEIYLHYQTIHIE
ELIGPKGKGQKNMRDLSPQEVYLYACEDADVTLKLKNILEQELKKNDAEKLFYEIEMPLV
PVLVNIESNGVRLDTEALKQSSEHFTTRLQSIEKEIYTLAEGEFNIASPKQVGEILFDKL
KIVEKAKKTKTGQYVTSEEVLESLRNKHDIIGKILEYRGLKKLLSTYIDALPQLINPKTG
RIHTSFNQTVTATGRLSSSNPNLQNIPIRDEDGKEIRKAFIPDDGCSFFSADYSQIELRI
MAHLSEDKNMIDAFLSGYDIHAATAAKIYKVDIKEVTADMRRKAKTANFGIIYGISVFGL
AERMNVDRKEAKELIDGYFETYPQVKSYMDKSIQVAREHGYVETIFHRKRFLPDINSRNA
VVRGYAERNAINAPIQGSAADIIKVAMARIYERFKAEGLKAKMILQVHDELNFSVPAKEK
EIVEQVVIEEMEKAYRMHVPLKADCGWGTNWLEAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaacagcaaactattcctcttggatgcttatgctcttatctatcgggcgtac
tatgcgttcattaaaaatccccgcattaattccaagggttttaatacttcagccatactg
ggattcgtcaacaccctggaagaggtgctgaagaaagagaaccccacccacattggagtt
gcattcgatccaccgggacccacattccgccacgaagcttttgaacagtacaaagctcaa
cgagaagaaactccggaagcaatccgtctttcggtacctattataaaagatattatcaag
gcttacagaatccccatcctggaggtagcgggatatgaagcggacgatgtaatcggaact
ctcgcaacagaagccggcaatcagggtatcactacttatatgatgactcctgacaaggac
tatggtcagttggtaacggatcatgtatttatgtatcgccccaaatatggagacaaagaa
tttgaagttatgggggtagaacaagtaaaagctaaattcgatattcaatcaccggcacaa
gtgatagatatgctcggactgatgggcgactcttccgataatattccggggtgtccgggt
gtgggagaaaaaactgcccaaaaattaattgccgagtttgggagtatagaaaatctgctt
gaacataccgatcagttgaaaggagcactgaagacaaaagtcgagacgaatcgggaaatg
attattttctccaaattcctggcaacaatcaaagtggatgtacctatccggcttgatatg
aactcactcgtccgggaacaagcagatgaggacacgttgcgtaaaatatttgaagagctg
gaattccgcacattgatggaacggatattcaaaaaagaatcatcacctgcctcccctatc
gccggtacattatttaatcaggaaaacggcccagttcaaggcaatctctttgaagaattt
acgcccgatcatacgaatgaagaaaaaaaatcaaatctggaaagcttaaattcattaagc
tacgactaccaattaattgatacagaggagaaaagaaacgaaattattaaaaaactactt
acatccgaaattcttgcgttagatacggaaaccaccggaacggatccaatggatgcagaa
ttggttggaatgagttttagtattaccgaaaatcaggcattttacgttccggtacctgcc
gaacgggaagaggcaatcaaaatcgttcgggagttcgaacctgtcttcaaaaacgagaag
tcactcaaggtcggtcagaatataaagtacgacatgctcgttctgcaaaactatgggatt
gaagtccgaggtaaactcttcgataccatggtagcacattatgtcctccaacccgaactc
cgtcataacatggattatctggctgaaatctatctgcattatcaaaccatacatattgaa
gagttaatagggccaaaaggcaaagggcagaaaaatatgcgcgacctctcccctcaagaa
gtttatctgtacgcctgcgaagatgcagacgttacactaaaacttaaaaatatactggaa
caggaattaaagaaaaatgatgccgagaagttattctatgaaatcgaaatgcctctggtc
cctgttcttgtcaatatcgagagcaacggagtgcgtttagatacggaggctctgaaacaa
tcgtcagaacacttcactacgagactgcaaagtatcgaaaaagaaatttatactctcgcc
gaaggagaattcaacattgcatctcccaaacaggtaggagagatactttttgataaattg
aaaatagtagagaaagctaaaaaaacaaaaaccggacagtacgtcacctcagaagaggta
ttggagagcttgcgaaataagcacgatattatcggtaagattttggaataccggggactt
aagaaactattaagtacttatatcgacgctctgccgcaattgatcaatcccaaaaccgga
cgtatacacacctcctttaaccagaccgttaccgcaacaggaagattgagttcaagtaac
cctaacctgcagaatatcccgattcgggacgaagacggtaaagagatacgcaaagctttt
attccggatgatggttgcagtttcttctccgccgactattcacagattgagctacgcata
atggcacacctgagtgaagataaaaacatgatcgatgctttcctcagtggctatgatatt
catgcggctacagctgccaagatttataaggtagatataaaagaggttaccgccgatatg
cgccgtaaggccaagactgccaatttcggcattatctacggtatctccgtatttggcctg
gcggaacgcatgaatgtcgaccgcaaagaagccaaagagctgatagacggttattttgaa
acctatccgcaagtaaaatcctatatggacaagagtatccaggtggcacgcgagcacggt
tatgtggaaacgattttccatcgcaaacgctttttaccggatattaactcccgtaatgcc
gtagtacgcggatacgcagagcgaaatgccatcaatgctccgatacagggaagcgcagct
gacataatcaaagttgctatggcacgtatttatgaacgtttcaaagcagaaggcctgaaa
gcaaaaatgattttgcaagtacacgatgagctgaatttcagtgtaccggcaaaagagaaa
gaaatagtagagcaagtggttattgaggaaatggagaaagcctaccgtatgcatgttccc
ttaaaagcagattgcggatggggtacaaactggctggaggcacattga
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