KEGG   Bacteroides fragilis BOB25: VU15_00715
Entry
VU15_00715        CDS       T03897                                 
Name
(GenBank) RNA polymerase sigma70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfb  Bacteroides fragilis BOB25
Pathway
bfb02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bfb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VU15_00715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfb03021]
    VU15_00715
Transcription machinery [BR:bfb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     VU15_00715
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 HTH_24 GerE HTH_23 Sigma70_ECF PhyR_sigma2 Nro1 HTH_5 HTH_11 HTH_28 SusR_C HTH_AsnC-type
Other DBs
NCBI-ProteinID: AKA54037
LinkDB
Position
complement(171019..171561)
AA seq 180 aa
MNNNIEYISKIKKGEEASFRHFVNSYSKDLFYYAQCFVRSKETAEEVVSDVFLDVWRHRE
EIDEIKNIKAWLLTLTHNKAISYLRKAENSSEIASWEEIDDFQIIGNLQTPDEEMISKEE
IAQINSLIQTLPPKCKVVFALAKIERLPYKEIADMLNISVKTINVHVAKALEIISNGLKK
NT seq 543 nt   +upstreamnt  +downstreamnt
atgaacaacaacatagaatatatcagcaagataaagaaaggagaagaggcttctttccgt
cattttgttaatagctattcgaaagacttgttctactatgcacagtgtttcgtacgaagc
aaagaaaccgctgaagaagtagtcagcgacgtctttctggatgtatggagacaccgggaa
gaaatagatgaaatcaagaatataaaagcttggttgctcacattaactcataacaaagcc
atctcctatctgagaaaagcggaaaattcaagtgaaattgcctcatgggaagaaatagat
gattttcaaataatcggaaatctgcaaactcccgatgaagagatgatcagcaaggaagag
atagctcaaatcaatagcctcattcaaacacttcctccaaaatgcaaggtagtcttcgct
cttgccaagatagaacgcctaccctataaagaaatagccgatatgctgaatatctcggtt
aagaccattaacgtccacgttgccaaagcattagagatcatttcaaatggtctgaaaaaa
taa

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