Bacteroides fragilis BOB25: VU15_00715
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Entry
VU15_00715 CDS
T03897
Name
(GenBank) RNA polymerase sigma70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfb
Bacteroides fragilis BOB25
Pathway
bfb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VU15_00715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfb03021
]
VU15_00715
Transcription machinery [BR:
bfb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VU15_00715
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_24
GerE
HTH_23
Sigma70_ECF
PhyR_sigma2
Nro1
HTH_5
HTH_11
HTH_28
SusR_C
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AKA54037
LinkDB
All DBs
Position
complement(171019..171561)
Genome browser
AA seq
180 aa
AA seq
DB search
MNNNIEYISKIKKGEEASFRHFVNSYSKDLFYYAQCFVRSKETAEEVVSDVFLDVWRHRE
EIDEIKNIKAWLLTLTHNKAISYLRKAENSSEIASWEEIDDFQIIGNLQTPDEEMISKEE
IAQINSLIQTLPPKCKVVFALAKIERLPYKEIADMLNISVKTINVHVAKALEIISNGLKK
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaacatagaatatatcagcaagataaagaaaggagaagaggcttctttccgt
cattttgttaatagctattcgaaagacttgttctactatgcacagtgtttcgtacgaagc
aaagaaaccgctgaagaagtagtcagcgacgtctttctggatgtatggagacaccgggaa
gaaatagatgaaatcaagaatataaaagcttggttgctcacattaactcataacaaagcc
atctcctatctgagaaaagcggaaaattcaagtgaaattgcctcatgggaagaaatagat
gattttcaaataatcggaaatctgcaaactcccgatgaagagatgatcagcaaggaagag
atagctcaaatcaatagcctcattcaaacacttcctccaaaatgcaaggtagtcttcgct
cttgccaagatagaacgcctaccctataaagaaatagccgatatgctgaatatctcggtt
aagaccattaacgtccacgttgccaaagcattagagatcatttcaaatggtctgaaaaaa
taa
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integrated database retrieval system