Bacteroides fragilis BOB25: VU15_00835
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Entry
VU15_00835 CDS
T03897
Name
(GenBank) DNA recombination protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
bfb
Bacteroides fragilis BOB25
Pathway
bfb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VU15_00835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfb03400
]
VU15_00835
DNA repair and recombination proteins [BR:
bfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VU15_00835
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
VU15_00835
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF5733
Motif
Other DBs
NCBI-ProteinID:
AKA50397
UniProt:
A0A0K6BP40
LinkDB
All DBs
Position
197899..198627
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AA seq
242 aa
AA seq
DB search
MLQKTVGIVLHVLKYNDTSNIVEMYTELSGRASFLVTVPRSKKATVKSVLFQPLALIEFE
ADYRPNTSLFRIKEAKSFSPFTSIPYDPFKSAIALFLAEFLYRAIREEAENRPLFAYLQH
SILWLDTCKISFANFHLVFLMRLSRFLGLYPNLDDYHAGDYFDMLNATFTSVRPQLHSSY
IQPDEAGRLLQLMRMNYETMHLFGMNRTERARCLAIINEYYRLHLPDFPILKSLDVLKEL
FD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaaaaaacggttggaatcgttcttcatgtattaaagtataacgatacatcgaat
atcgtagagatgtatactgagttgtcagggcgtgcgtcctttttggtcaccgtgcctcgt
tctaagaaggctactgtcaaatcggtgttgtttcaaccattggctttaatcgaatttgag
gcagattacagaccgaatacttcactttttagaattaaggaggccaaatctttcagtccc
tttacttctattccctatgatccttttaaatcggctatcgctctttttctcgctgaattt
ctttatcgtgccattcgtgaggaggctgagaaccgtccgttgtttgcctatttacaacat
tctatattatggttggatacctgtaagattagttttgctaatttccatctggtatttctg
atgcgtctttcacgctttttggggctgtaccccaacctggacgattatcatgcgggtgac
tattttgatatgttgaatgccacttttacgtccgttcgtcctcaactgcattcttcttat
atacagcccgatgaagccggacggttgttgcagttgatgcgtatgaattatgaaaccatg
catctttttggaatgaaccgcacagaaagagcccgttgtctggctattattaatgaatat
taccggttgcatcttcccgattttcctatactgaaatcactggatgtattgaaggagctg
tttgattag
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