Bacteroides fragilis BOB25: VU15_01085
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Entry
VU15_01085 CDS
T03897
Name
(GenBank) carbohydrate-binding protein
Organism
bfb
Bacteroides fragilis BOB25
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_43
Laminin_G_3
CBM_6
aBig_2
F5_F8_type_C
F5_F8_type_C_2
Laminin_G_2
CBM_35_2
TS_C
RmlD_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AKA50443
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Position
274259..277252
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AA seq
997 aa
AA seq
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MFINSLRKSPFSCSPGLILLGAFTLLSVPVYGQQIQQAERQVQQVPFLQFNFDEQGGETA
RNSGRGGSKYDARINGGTVEWGPGLQQGAARLSNKGHFKLPDGVLAHVKDFTLSVWVYLN
EQSDNQTVCTFACGTDRYLILTTQRGNEENGVSLVMTKTQESGNHTDKEERIAYTRQKGK
LSANAWHHLAFTLKGSVGTLYVDGVKAEIKTDFTVNPSLLGNTTDNYIGRPTWPDPYLNG
GIDDFRLYDYALTDRQVYELASVADGRLVQEDRDGLSLGDLSAVTTDLVLPSSGKSGTTI
SWSSAQGQYISDSGKLYRPDAGTGNKKATLTATVRKGDVALTKDFVLTVKDIGTEPEDVN
VFSMQTGNPTVPAYLADASFYYDDRTKTFYAFGTNDGAGGENVYPAQMWYSKDCKEWKNK
VIAFPKSWTDYAGTLCVWAPSIEYNPDTKKYYLMYSIASNTFVGMADDLLGPWEDANGAA
PGKMLFKGYDGQFFMDDDRTMYIVTDSWHFKIMKLKFDEAGKIYIDNSDPVFAKSDSNPF
IGTYHYTQIEEIKNAFEASFIFKRNNLYYLMWSFNGSENYNVRYAVADKITGPYREINRS
MTVPILQRDDANRILGPGHHSMFCYGGRTFIAYHRQHYPFVDSKRQTCIDEVFFNEDGSI
RPITPTHKGVTVAPDVPGDHRTNLALGKQTLTSSARVYDDSEFAPRYRTHGISFCYAGNF
AVDENYGTHWDPGVGAHKPWLIVDLGSECKVDEIETIFEFTSRTYKYKLEYLSQKEAGSL
DAASGSHLWKVFADRSTDGVGQSPVTDTKPGNSPVKARFIRLTILEGVDIPLRADGLDKK
NAENALSIFELKVFGEDRSDALNRIFEAESFHNLYGIALEKNAAENGFIMGQIDNNDYLL
YRNVDLGKGAGTFTAKVASGTEGGKIEVYLGSLKGKPIGVLEVGNTGGDQSWEIKSTSLE
RIARGRQEKLYLLFKGKTGTENLLKLDWFQFTKDRMK
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgtttataaattctttaaggaaatcccctttttcctgttctccgggattgatcctgttg
ggggcgtttaccctgttatctgttcctgtgtatgggcagcagatacaacaggcggaaaga
caggtgcagcaagttcctttccttcaattcaacttcgatgaacagggaggagagacagcc
cgtaacagtggaagaggaggctcaaaatatgatgcccggatcaacggaggtacggtggag
tgggggccgggtctgcagcagggagcggcaagactcagtaacaaaggacacttcaagtta
ccggacggagtcctggcacatgtgaaagatttcactttgtctgtctgggtctatctgaat
gaacagtctgacaaccaaacggtgtgcacgtttgcttgcggaacagaccgttacctgatt
ttgacaacccaaagagggaatgaagagaacggcgtttctctggttatgacgaagacacag
gagagtggaaatcataccgacaaggaagaacgcattgcatatactcgtcagaaaggtaaa
ctgtcggctaacgcctggcatcatcttgctttcactctgaaagggagtgtcggcactctt
tatgtagacggagtgaaagctgaaataaagacggacttcaccgtgaatccttcattgtta
ggtaatacgaccgataattacattggccggccgacctggcccgatccatatctgaatggc
gggattgatgatttcaggttgtatgactatgccttgacagaccggcaggtatacgaactt
gcatcggtagcggacgggcggttggtgcaggaagacagggacggactttcgttgggcgat
ttgtcggcggtaaccaccgaccttgtgttgccttcgtccggtaagagcggtactaccatc
tcgtggagctcggctcaggggcagtacatcagtgacagtggaaagctttaccgccccgat
gcgggaaccggaaacaagaaggcaaccctgacagcaacggtccggaagggagacgtggct
ttgactaaagactttgttttgaccgtcaaggatatagggactgaaccggaagatgtgaat
gtcttttcgatgcagacgggaaatccgactgtgcctgcttatctggcagacgcatctttc
tattatgatgaccggaccaagactttttatgctttcggaaccaatgacggagcgggtggt
gaaaatgtgtatccggcccagatgtggtactccaaggactgtaaggaatggaagaataaa
gtgatcgccttcccaaaatcatggacggactatgccgggaccttgtgtgtatgggctccc
agtatcgaatacaatccggatacaaagaagtattatctgatgtatagcattgcttcgaat
acctttgtcggtatggcggatgacctcttggggccgtgggaagatgccaatggggcagct
cccggtaagatgcttttcaagggatatgacggacagttttttatggatgatgaccggacg
atgtatattgtaactgactcctggcactttaagattatgaagttgaagttcgatgaggcc
ggaaagatctatattgacaacagtgatccggtattcgccaaaagcgattccaatccattt
atcggcacttaccactatacgcagatagaagagataaaaaatgcttttgaagcttcgttt
atttttaagagaaataatttatactacctgatgtggtcgtttaacggtagcgagaattat
aatgtccgatatgccgtagccgataagatcacggggccttaccgggagatcaaccggtct
atgactgttcctatattgcaacgtgatgatgccaatcggattttgggtcccggacatcat
tcgatgttctgttacggagggcgtacgtttattgcttatcatcggcaacattatcccttt
gtagacagtaaacggcagacttgtatcgacgaagttttctttaatgaggatggaagtatc
cgtcccattactccaacccacaaaggggtaacggttgctcccgatgttccgggcgatcat
cgtacgaatcttgctttaggaaagcagaccttgacctcttcggcgagggtgtatgatgat
tcggaatttgctccccgctatcgtacacacggcatttcattctgttatgccggtaacttt
gccgtagacgagaattacgggacccattgggatcccggagtcggtgcacataagccttgg
ctgattgtagatttgggcagcgagtgtaaagtggatgagatagagacaatttttgagttt
acaagccgtacttacaagtataaactcgaatatttgtcacagaaagaagccggcagtctg
gatgcagcctccggcagtcatttatggaaagtgtttgcagaccggagtacggacggtgtc
ggacaatctccggtgacggatacgaagccgggcaattctccggtgaaagcaaggtttatc
cgtctgaccattctggaaggggttgacatccccctgagagcagacgggctggacaagaag
aatgccgaaaatgcattaagtatttttgaattgaaagtttttggagaagatcgctcggat
gccctgaaccgtatttttgaggcggaaagcttccataacctatatgggatagctcttgaa
aagaatgcggccgagaacggatttatcatggggcagatcgataataacgattatttgctc
taccggaatgtagatttaggcaaaggggcaggcacgtttacagctaaagttgcttcaggt
accgaaggcgggaagatagaggtttatctgggttccttgaagggaaaacctatcggagtg
ctcgaagtgggcaatacgggtggcgaccaatcctgggaaatcaagtcaacgtctcttgaa
cggattgcgagagggcggcaggagaaattgtatctgctgttcaaaggtaagaccggtacc
gagaacctattgaaactggattggtttcagtttactaaagaccggatgaaataa
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