Bacteroides fragilis BOB25: VU15_01915
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Entry
VU15_01915 CDS
T03897
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
bfb
Bacteroides fragilis BOB25
Pathway
bfb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VU15_01915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfb03400
]
VU15_01915
DNA repair and recombination proteins [BR:
bfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
VU15_01915
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA
ABC_tran
AAA_29
AAA_27
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
AKA50586
UniProt:
A0A149N0R3
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Position
474511..475863
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AA seq
450 aa
AA seq
DB search
MLFPEKYYIFGKSIIGGTVKKLRTDRQTLNDLGIVESTYGEKTLFSLFDMTESDGGKRCL
EEWLVHPLSDWKALHERQEAIRYPDFPEIRICREELDFIEFYLSQGDRPTRVSYLESAFS
YIFRHFRATPERYVIRRGTKLLENVLLELKTFADHVTELSPRLIRNIAATISEIYQATEL
GKMVDSCGQEDSFYRTDRLDYIFRYRRNHTIAALLSIVYQLDAIRTMHRTAVTKGWCFPS
FTNDSKFMLCNFYHPQVKDAVANDWEMENGNICIFTGSNMAGKSTTLKAIASAVWLAHAG
FPVPASSMVCPMFDGIFTSINLPDSLRDGRSHFYAEVLRVKEVLEQINKGHHCFVLFDEL
FRGTNARDAFEASVAVAEVLKAKAYSRFLISTHIIELARKLDGDDACCFYYLESAIVDDE
LICNHKVKPGISESRVGYWIVKKELAGFEK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtgctattcccggaaaaatattatatctttgggaaatctatcataggaggtaccgtgaaa
aagttgcgaacagatcgacagaccctcaatgacttaggaattgtggaaagtacgtatggc
gagaaaactcttttctcgctctttgacatgacggaaagtgatggaggaaagaggtgtctg
gaagagtggctggttcaccctttgtctgattggaaagcattgcacgaaaggcaggaagcg
atccgctatccggactttccggagatacgtatttgtagggaagaactggatttcattgag
ttttatctcagccagggagatcgtccgacgagagtgagctatttggaatctgccttttca
tatatcttccggcatttcagggctactcccgagcgttatgtcatccgtagggggacgaag
ttgcttgaaaacgttttgttggagctgaaaacttttgcagatcatgtgacggaactctct
ccccggttgatccgtaacattgccgccactatctcagagatctatcaggctacggaattg
ggaaaaatggttgattcctgcgggcaggaagatagcttttaccggaccgaccgtttggat
tacattttccgttatcgacgaaatcataccattgcagctcttctttctattgtatatcaa
ttggatgccattcgtaccatgcatcggacagcagtgacgaaaggttggtgctttccttct
tttactaatgatagcaagtttatgctgtgcaatttctatcatccgcaagtgaaagatgct
gtagcgaacgattgggagatggagaatgggaatatctgtatctttaccgggtcgaatatg
gcgggtaaatccacgactttgaaggcaatagcatctgctgtatggttggctcatgccgga
tttccggtaccggcttcctcgatggtttgtcctatgttcgatggtatttttacttctatc
aatctgccggattctctgagagatggtcgcagccatttctatgcggaagtattgagagta
aaagaggtgctggaacagattaacaaggggcatcactgttttgtacttttcgatgaattg
tttaggggaaccaatgcgcgggatgcttttgaggcatcggttgccgtagcagaggtgttg
aaagcaaaggcatatagccgttttttgatatctacacatatcatagaattggcccgtaaa
ttggatggagatgacgcctgttgtttttattatttagaatctgcgatagtggatgacgag
ttgatatgtaaccataaagtgaagccgggtatttcagagtcaagagttggatattggatt
gtgaagaaagaacttgccggatttgagaaataa
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