Bacteroides fragilis BOB25: VU15_02200
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Entry
VU15_02200 CDS
T03897
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
bfb
Bacteroides fragilis BOB25
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfb03400
]
VU15_02200
DNA repair and recombination proteins [BR:
bfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VU15_02200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
DUF7125
AAA_16
AAA_24
nSTAND3
AAA
AAA_14
nSTAND_NTPase5
NTPase_1
Elong_Iki1
DUF7129
AAA_29
zf-RING_10
HypA
AAA_5
DZR
Oxidored_nitro
Nitro_FeMo-Co
fvmYukDl_N
NACHT
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AKA50633
UniProt:
A0A0K6BPV5
LinkDB
All DBs
Position
complement(562421..563788)
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AA seq
455 aa
AA seq
DB search
MAKEKTVYVCSNCGQESPKWVGKCPSCGEWNTYVEEIVRKEVPNKRPVSGIESPKAKPVT
LSEIEADEEPRIDMHDEELNRVLGGGLVPGSLVLIGGEPGIGKSTLVLQTVLHMPERRIL
YISGEESARQLKLRADRLTRTSSDCLIVCETSLEQIYVHIKNTRPDLVIIDSIQTISTES
IESSPGSIAQVRECSASILRFAKETHTPVLLIGHINKEGSIAGPKVLEHIVDTVLQFEGD
QHYMYRILRSIKNRFGSTAELGIYEMRQDGLRQVSNPSELLLSQDHEGMSGVAIASAIEG
VRPFLIETQALVSSAVYGNPQRSATGFDIRRMNMLLAVLEKRVGFKLAQKDVFLNIAGGL
KVNDPAIDLAVISAILSSNMDAAIEPEVCMAGEIGLSGEIRPVNRIEQRIGEAEKLGFKR
FILPKYNMQGIDTKKLRIELVPVRKVEEAFRTLFG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagaaaaccgtttatgtatgcagtaactgcggacaggaatcacccaaatgg
gtgggcaaatgtccttcgtgtggcgaatggaatacctatgtagaagagattgttcgcaag
gaagttccgaataaacgtccggtatcaggcatcgaatcgcccaaagccaaacccgtcacc
ctgagcgagatcgaagcagatgaagaaccccgcatcgacatgcacgacgaggagctgaac
cgggtgctgggaggagggctggtacccggatcgctggtactgatcggtggcgaacccggc
atcgggaagtccacactggtgctccaaaccgtgctccacatgcctgagcggaggatactc
tacatctcgggagaagagagcgcaaggcaactgaaacttcgtgccgaccggttaacccga
acttcgagcgactgcctgattgtctgcgaaacatcgttggaacagatctatgtacatatc
aaaaatacacgtccggacctagtaatcatcgactccatacagacgatatcgaccgaaagc
atcgaatcgtcaccgggaagcatcgcgcaagtccgggagtgctcggcatccatcctccgt
tttgccaaagagacgcataccccggtgttgctgatcgggcatatcaacaaagaaggcagc
attgccggaccgaaggttctagagcacatcgtagacaccgtactccaattcgagggagac
cagcattatatgtaccgtatcctgcgcagcatcaagaaccgctttggaagtaccgctgaa
ttgggcatctatgagatgcgtcaagacgggcttcgccaagtcagcaacccttcggaattg
ttactgtcgcaggaccacgaaggcatgagcggggtagccatcgcatctgccatcgaaggg
gtaagacccttcctgatagagacgcaagcacttgtcagctctgcggtttacggcaatccg
caacgttcggcaacgggattcgatattcgccgcatgaacatgctgctggccgtattagag
aagcgtgtcggatttaagctggcacaaaaagatgtctttctaaatattgccggaggactg
aaggttaacgaccctgccatcgacctggctgttatcagtgccatcctttcatccaatatg
gatgctgccatcgaacctgaggtttgcatggccggagaaatcggattatccggtgaaatc
cgtccggtaaaccggatcgaacaacgtatcggtgaagctgagaagctcgggttcaaacgg
ttcatcctacctaaatacaacatgcagggcatcgatacaaagaagctgaggatagaactg
gtgccggtaagaaaggtggaagaagcattccggacgctcttcgggtga
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