KEGG   Bacteroides fragilis BOB25: VU15_02260
Entry
VU15_02260        CDS       T03897                                 
Name
(GenBank) RNA polymerase sigma70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfb  Bacteroides fragilis BOB25
Pathway
bfb02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bfb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VU15_02260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfb03021]
    VU15_02260
Transcription machinery [BR:bfb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     VU15_02260
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 GerE Sigma70_ECF HTH_40 GMT-wHTH HTH_24 DUF722 HTH_23 RasGEF_N HTH_16 PhyR_sigma2
Other DBs
NCBI-ProteinID: AKA50644
LinkDB
Position
577366..577953
AA seq 195 aa
MNQFLDFDQKLYAELRKGSEHAFVTVFERYNRLLYALAYRYFKSGEEAEDAVQYTFMKLW
EQRSSFEFQSGIRSLLFTILKNYIMNELRHRQIVFEKHYEMAQRNEEADDSFLKNFEDKD
FREHLRTAIGKLPPQKQKICRLKIEKGLSNQEIADEMHITVPTVKSHYTQAIKILRAEIE
SLIVLLHVLWIHFLE
NT seq 588 nt   +upstreamnt  +downstreamnt
atgaatcaatttttagattttgaccagaaactgtatgctgaactccgtaaaggcagcgag
cacgcttttgttactgttttcgaacggtataaccgcttgttgtatgcgctggcttatcgg
tattttaaatcaggtgaagaggctgaagacgcagtgcaatatacttttatgaaattgtgg
gagcaacgttccagttttgaatttcaatccggcatcagaagcctgttgttcaccatcctg
aaaaactacattatgaacgagttgagacatcggcagattgtctttgaaaagcattacgag
atggctcaacggaacgaagaagcggacgacagttttctgaagaattttgaagataaagat
ttcagggaacatcttcggactgccatcggtaaactacctcctcaaaaacagaaaatatgc
cgcctgaaaatagaaaaaggactttctaaccaggaaatagcggacgagatgcatatcacg
gtgcctaccgtaaagtcccattatactcaggccattaagatactccgtgcggagattgaa
tcgttaattgtattacttcatgtattgtggattcattttttagagtga

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