Bacteroides fragilis BOB25: VU15_03130
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Entry
VU15_03130 CDS
T03897
Name
(GenBank) ATP-dependent endonuclease
Organism
bfb
Bacteroides fragilis BOB25
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
UvrD_C_2
AAA_19
PIF1
SLFN-g3_helicase
TsaE
PhoH
Helicase_RecD
AAA_16
AAA_22
RNA_helicase
NACHT
TrwB_AAD_bind
ResIII
AAA_7
cobW
SRP54
EutQ
NPHP3_N
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AKA50797
UniProt:
F7LKX5
LinkDB
All DBs
Position
790809..792227
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AA seq
472 aa
AA seq
DB search
MINNYLERQIKENFSYQPTFEQEIAVKSLSEFLLSTANDTVFVLRGYAGTGKTSLVGALV
KAMDKLQQKSVLLAPTGRAAKVFSAYAGHPAFTIHKKIYRQQSFSNEVSNFSINDNLTTH
TLYIVDEASMISNEGLSGSMFGTGRLLDDLVEFVYSGAGCRLLLMGDTAQLPPVGEEQSP
ALATEALKGYGLNVIEVDLTQVVRQVQSSGILWNATQIRQLIAEDECFSLPKIKVSGFPD
IQVVRGDELIDTLTGCYEKDGMDETIVVCRSNKRANIYNKGIRAQILYREDELNTGDLLM
VAKNNYFWTEKYKEMDFIANGEIAVVRRVRRTRELYGFRFAEVLLAFPDQNDFELEANLL
LDTLHSDAPALPKTENDRLFYSVLEDYVDITVKRERMKKMKADPHYNALQVKYAYAVTCH
KAQGGQWQNVFLDQGYMSDEYLTPDYFRWLYTAFTRASKTLYLVNYPEEQIE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgataaataactatttagagcggcaaattaaggaaaatttttcttatcagccaactttt
gagcaagaaatagctgtaaaatctctttcggagtttctactttctacggctaatgatacg
gtttttgtgcttcgtggatatgcgggaacaggaaagacttctcttgtcggggccttagtg
aaagcgatggataagttacaacagaaatcggttttactggctcctacgggaagagcggct
aaagtattttctgcttacgcaggacacccggcttttaccattcataaaaagatatacagg
cagcagtctttttcgaatgaagtaagtaatttttcaattaatgataatctgactactcat
acattatatattgtagatgaggcttccatgatttcgaatgaaggtttgtccggttcgatg
ttcggtaccggacgtctgttggatgatttggtggagtttgtctattccggtgcagggtgt
cgtttattgttgatgggagatacggctcagttgcctccggtaggagaagagcaaagtccg
gcacttgctaccgaggcattgaaaggatatggactgaatgtcatagaggttgatctcaca
caggtggtacgtcaggttcagtcgtccggtattttatggaatgccactcagattcggcag
ttgattgctgaagacgagtgtttttcgctgcctaagataaaagtaagcggatttccggat
atacaggtggtacgtggcgacgaattgatcgataccctgaccggctgctacgaaaaagac
ggaatggacgagacgattgtggtatgccgttccaataaacgggctaacatatataataaa
ggtatacgtgctcagattctttacagggaagatgaactgaatacgggtgacttactcatg
gtagcgaagaataattacttctggacagagaagtataaagaaatggattttatagcgaac
ggagagattgctgtggttcgtcgggtgaggcgtactcgtgaactgtatggtttcaggttt
gctgaagtacttcttgcgtttcccgatcaaaatgactttgagttggaagctaatttgttg
cttgatacgcttcattcggatgcacctgctttacccaaaacagaaaacgaccggcttttt
tattctgtacttgaagactatgtggacatcaccgtcaagcgggagcgaatgaaaaaaatg
aaagctgacccacactacaatgctctacaggtgaagtacgcttatgcggtgacctgtcat
aaggcgcagggcgggcaatggcaaaatgtttttcttgaccaggggtatatgtcggatgag
tatctgacacctgattatttccgttggctgtatacagcttttacgcgtgcatcgaaaact
ctctatctggtgaattatccggaagagcaaatagagtga
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