Bacteroides fragilis BOB25: VU15_03160
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Entry
VU15_03160 CDS
T03897
Name
(GenBank) RNA polymerase sigma70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfb
Bacteroides fragilis BOB25
Pathway
bfb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VU15_03160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfb03021
]
VU15_03160
Transcription machinery [BR:
bfb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VU15_03160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_40
DUF1492
HTH_23
UPF0122
DUF134
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AKA50803
LinkDB
All DBs
Position
complement(803462..804016)
Genome browser
AA seq
184 aa
AA seq
DB search
MDDTFDITYKALFRRYYPNLMFYATRLVGDEEAEDVVQDVFVELWKRRDSMVIGDQIQAF
LYRAVYTRALNVLKHRSIEDGYCAAVEEINQKRAEFYQPDNNEVIRRIEDRELRNEIYQA
INELPDKCKEVFKLSYLHEMKNKEIADVMGVSLRTVEAHMYKALKFLRNRLGHLWFLFLL
FFIK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggacgacacatttgatataacctacaaagccctgttccggaggtactatccgaacctg
atgttctacgccacccgcctggtgggcgatgaagaagcagaagatgtggtacaggatgta
ttcgtggaactgtggaaacgaagagattccatggtaataggcgaccagatccaagccttc
ctctatcgggcggtatatacccgggccttgaatgtgctgaaacatcgcagtatagaggac
ggatattgcgctgctgtggaagaaatcaaccaaaaacgagcggaattctatcagccggac
aacaacgaagtaatccggcggatagaagaccgcgaattgcgaaacgaaatctaccaagcc
attaacgagctaccggacaaatgcaaggaagtgtttaagttgagctatctgcacgaaatg
aagaataaagaaatagccgacgtgatgggagtctctttacgtacggtagaagcccacatg
tacaaggcactgaagttcctacgaaaccgtctcggccatttatggtttttatttctacta
ttttttatcaaatag
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integrated database retrieval system
