Bacteroides fragilis BOB25: VU15_04475
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Entry
VU15_04475 CDS
T03897
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
bfb
Bacteroides fragilis BOB25
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfb03016
]
VU15_04475
Enzymes [BR:
bfb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
VU15_04475
Transfer RNA biogenesis [BR:
bfb03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
VU15_04475
Prokaryotic type
VU15_04475
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AKA51034
UniProt:
A0A1C0X6D6
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All DBs
Position
1163683..1164597
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AA seq
304 aa
AA seq
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MEKFELHILGCGSALPTTRHFATSQVVNLRDKLFMIDCGEGAQMQLRKSRLKFSRLNHIF
ISHLHGDHCFGLMGLISTFGLLGRTAELHIHSPKGLEELLTPMLNFFCHTLAYKVIFHEF
DTRQTSVVYEDRSMTVTTIPLQHRIPCCGFLFAEKARPNHIIRDMVDFYKVPVYELNRIK
NGSDYVTPEGEVIANTRLTRPSDPPRKYAYCSDTIFRPEIVEQLSGVDLLFHEATFAESE
LARAKETYHTTAAQAARIALEAGVRQLVIGHFSARYEDESILLKEASAVFPNTILAKENL
CISL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatttgaattacatatattgggttgcgggtccgcattgcctactacccggcat
tttgctacttcacaggtagttaatttgcgtgataaactttttatgatcgattgcggagaa
ggagcacaaatgcaattgcgtaaatcacggttgaaattctcacggttgaatcatatcttt
atctcgcatctgcatggtgaccattgcttcggattgatgggacttatttccactttcggg
ttactgggacgtacggctgaattacacattcattctccaaaaggattggaagagttgttg
actcccatgctcaatttcttttgccatacattggcctataaagtcatttttcatgaattc
gataccagacagacttcagtggtttacgaagatcgttcgatgacggtcactactattccg
cttcagcaccgtattccttgttgtggctttctgtttgccgaaaaagcacgccctaatcat
attatacgtgatatggtcgatttttataaggtgcctgtttacgaactaaaccggataaag
aatggatctgattacgtgactcccgagggagaagtgattgccaatacacgtttgacccgg
ccttcggatcctcccagaaagtatgcctattgttccgatacgatttttaggccggaaata
gtggaacaactttccggtgtcgacttactttttcatgaagcgacctttgccgaatcagag
ttggcacgtgccaaagaaacctatcatactacagctgctcaggcggcacggatagctttg
gaggccggggtacgccagttggtaatcggtcacttttctgcccgttacgaagacgagagt
attttgctgaaagaagcttcggcggtattcccgaatacgattctggcaaaagaaaatttg
tgtataagtctttaa
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