Bacteroides fragilis BOB25: VU15_04565
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Entry
VU15_04565 CDS
T03897
Name
(GenBank) glycan metabolism protein RagB
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
bfb
Bacteroides fragilis BOB25
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bfb02000
]
VU15_04565
Transporters [BR:
bfb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VU15_04565
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Ortholog
Paralog
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
COG4_N
Motif
Other DBs
NCBI-ProteinID:
AKA51052
UniProt:
A0A149NDF6
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Position
1188025..1189665
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AA seq
546 aa
AA seq
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MKSLKYIVALALAAGLFQACDLERYPLTDLSEETFWNSESNAELALTSLYRGSLTDGVEY
NPSDWWSYHGMIMMEHLSDNAFDRRGENNPFFKISSGNLTADNAFIKRYWETSYKRIGYC
NRFLVGIQNSSESEKKTRMIAEARFLRATQYFYLASYFKNVPLVENVLTGEEANNVTKTS
QADILKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFLGRTCMLQKDWKSGAKAFH
DIMELGDNAINANYQELFYPSTGTSNKENIFYIQYLENYLGTGLPQHALSAKDGGWSLVN
PAADLYESYEFKDGTPFSYDDPRYDPSNLGKDRDPRLDYTIYYNGAIFMGTEYKMSPDYS
AAKKEKLDYTSEASRTGFMMRKYFEESTPINDVQSANGLTPVIRYAEVLLGYLECLVEDN
QTITQGILDETINAVRGRASVNMPPVTEVTPAKLREIVRHERRIELAMEGIRYWDIMRWG
IAHEVLSQKIWGAPYPGSTQYATTTKEVDPTGNYRWYVGKRAFRNPTDYTWPIPQSEQNI
NPNLRD
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtttaaaatatatagtagcattggcattggcggcaggactgtttcaagcttgt
gatttagagcgctatccactgacagacttgtccgaagagactttttggaatagcgaatcg
aatgcggaattggcattgacttctctgtatagaggaagcctgacagacggcgtagagtat
aacccttcggattggtggtcctatcacggaatgattatgatggaacatctttcggataac
gcttttgaccgtcggggagagaacaatcctttctttaagatttcgagtggaaacctgact
gcagacaatgcttttattaaaaggtattgggagacgtcttataagcggatcggttattgt
aaccgtttcttggtcggtatccagaatagctcggaatcggaaaagaaaacacggatgatt
gcggaagcccgtttcctgcgtgcgacacagtatttttaccttgccagctatttcaaaaat
gttcctttggtagagaatgtgctgacgggtgaagaagccaacaatgtgacaaagacctca
caggccgatatcctgaaatggtgtgtaaccgaatttacagcagctgcggccgatttaccc
cgtttctccgccattccggcgggagaagccggacgtgcttgtaagcaggcggctcttgct
tttctcggacgtacctgcatgttgcagaaagactggaaaagtggagcaaaggctttccac
gatattatggaattgggagataatgcgataaacgccaactatcaggagctgttttatcct
tctaccggaacttcgaacaaggagaatattttctacatccagtatttggaaaactatctg
ggtaccggtctgccgcagcatgcactttctgctaaagacgggggatggagcctggtcaat
ccggctgctgatttatacgaatcgtatgaatttaaggatggaactcctttcagctatgat
gatccgagatatgacccgtctaatttaggaaaggatcgcgatccgcgtctggattataca
atttactataacggtgccatctttatgggtacagagtataagatgagtcctgactacagt
gcagccaagaaggagaagctcgattatacgagcgaggcttccagaactggctttatgatg
aggaaatattttgaagaatcgacacctataaacgatgtacagagcgcaaacggactgact
ccggttattcgttatgccgaagtgttgttgggctatctggaatgcctggttgaagataat
caaacgatcactcaaggaatattggacgagactatcaatgcagtgagaggacgtgcaagt
gtgaacatgcctccggtaaccgaggtaactcctgcgaagcttcgtgaaatcgtgcgtcac
gaacgccgcatcgagttggctatggaaggtatccgttactgggatatcatgagatgggga
attgcacacgaagtattgtcccagaaaatttggggtgcgccttacccgggttcgactcag
tatgcgactacgaccaaagaggttgacccgacaggaaactaccgctggtatgtgggcaaa
cgtgctttccgtaatccgacggattatacatggccgatccctcagtccgagcaaaatatt
aacccgaatttacgtgactaa
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