KEGG   Bacteroides fragilis BOB25: VU15_05015
Entry
VU15_05015        CDS       T03897                                 
Name
(GenBank) restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
bfb  Bacteroides fragilis BOB25
Brite
KEGG Orthology (KO) [BR:bfb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bfb02048]
    VU15_05015
Enzymes [BR:bfb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     VU15_05015
Prokaryotic defense system [BR:bfb02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   VU15_05015
SSDB
Motif
Pfam: SWI2_SNF2 EcoR124_C T1R_D3-like ResIII HSDR_N SNF2-rel_dom Glyco_hydro_3_C
Other DBs
NCBI-ProteinID: AKA51128
LinkDB
Position
1301771..1304599
AA seq 942 aa
MSTQSEAALEAGLIATLRQMDYEYVQIVEEDNLYTNFKRQLEIHNRKRLEEHGRTEFTAE
EFEKILIYLEGGTRFEKAKKLRDLYPLDTADGQRIWVEFLNRQQWCQNEFQVSNQITVEG
RKKCRYDVTILINGLPLVQIELKRRGVELKQAYNQIQRYHKTSFHGLFDYIQLFVISNGV
NTRYFANNPNSGYKFTFNWTDAANHPFNELDKFAVFFLEKCTLGKIIGKYIVLHEGDKCL
MVLRPYQFYAVEKILDRVQNSNDNGYIWHTTGAGKTLTSFKAAQLVSELDDVDKVMFVVD
RHDLDTQTQSEYEAFEPGAVDSTDNTDELVKRLQSNSKIIITTIQKLNAAVSKTWYSSKI
DAIRHSRIVMIFDECHRSHFGDSHKKIMKFFGNAQIFGFTGTPIFTENAVDGHTTKEIFG
NCLHKYLIKDAIADENVLGFLVEYYHGNEIVDNDNQARMEEIAKFILNNFNKSTFDGEFD
ALFAVQSVPMLIRYYKIFRSLNPKIRIGAVFTYAANNSQDDEQTGMGTGQYAKESVGEAD
ELQAIMDDYNENFGTSFTTENFRAYYDDINLRMKKKKADMKPLDLCLVVGMFLTGFDSKK
LNTLYVDKNMEYHGLLQAFSRTNRVLNEKKRFGKIVCFRDLKNNVDTSIKLFSNSDNPED
IVRPPFEKVKQEYKSLATDFLQKYPTPSSIDFLQSENDKKNFVLAFRDIIRKHAEIQIYE
DYSEDAEDLGMTEQQFNDYKSKYLDITVGFIDPPAAPSTVAEDPVPYGNNQGLEDIDFCL
ELLHSDIINVAYILALINDLDPYSDDYSEKRQNIIDTMIKDAGMRGKAKLIDGFIKKNVD
EDKENFMNGRNKADGTNELEERLNQYIVSERTKAVNDLADEEQISAEVLNHYMKEYDYLQ
KEQPEIIQKALKEKHLGLIKTRKALTRIMERLRSIIKTFNWE
NT seq 2829 nt   +upstreamnt  +downstreamnt
atgtcaacacaaagcgaagcggcattggaagccggactgatagctacactccgacaaatg
gactacgagtatgtccagattgtcgaggaagataatctttataccaatttcaagcggcag
ttggagattcacaaccgcaaacgattggaagagcacggacgtactgagtttacggcagaa
gagtttgagaagattctcatataccttgaaggtggtactcgctttgaaaaggcaaagaaa
ctccgtgacttatatccgcttgatacggctgatggacagcgtatatgggtggaatttcta
aataggcagcagtggtgtcagaatgaatttcaggtttccaaccagattacggtggaagga
cgtaaaaaatgccgctatgatgtgacgattctaatcaatggtttgccacttgtgcagatt
gaattgaaacgtcgtggcgtggaacttaaacaggcatacaaccaaatacagcgttatcac
aagacttcgtttcacggattgtttgattatatccaactgtttgtcatatccaacggtgtt
aatactcgctattttgccaataatccaaatagtgggtataagttcacattcaactggaca
gatgctgccaatcatccgttcaatgaattggataagtttgccgtattcttcttggaaaaa
tgtacgcttggcaaaatcataggaaagtatattgtgctgcatgagggcgacaagtgcttg
atggtacttcgtccttaccagttctatgcagtggagaagattctggatcgtgtgcagaac
tccaacgataacggctatatctggcatactacaggtgcaggaaagacattgacttcgttc
aaggccgcacaacttgtgtcagaattggacgatgtggataaggttatgtttgttgttgat
cgacacgaccttgatacccagactcaatcggaatacgaagcgtttgaaccaggggctgta
gatagtactgataatacggatgaattagtgaaacggcttcaaagcaattccaaaattatc
ataaccaccattcaaaaacttaatgcggcagttagtaagacgtggtatagcagcaagatt
gatgctatccgtcattcacgtatcgttatgatatttgatgagtgccatcgcagtcatttt
ggggatagtcataagaagataatgaagttttttggcaatgcccaaatattcggttttact
ggaacacctatcttcaccgagaatgcggtggatggacataccactaaggaaatattcgga
aactgtcttcataaatatcttattaaagatgcaatagcggatgaaaatgtgcttggcttc
cttgtggagtattatcacggcaacgaaatagttgataacgataaccaagctcgtatggag
gagattgccaaatttatccttaacaattttaacaaatctacattcgatggagagtttgat
gctttgtttgcggtgcaatccgtgccgatgcttatacgctattacaagatattcagatcg
ttgaatccgaaaatccgtattggtgctgtgtttacttatgctgctaacaatagtcaggat
gatgaacagaccggcatgggtacagggcagtatgcaaaagagagcgtgggtgaggcggat
gaactgcaagccatcatggacgattataatgaaaacttcggcacatcttttaccacggag
aacttccgtgcttactatgatgacatcaatctgcgcatgaaaaagaagaaggcggatatg
aaaccgcttgatctttgtcttgttgtgggtatgttccttacaggctttgacagtaaaaag
ctgaatacgctctatgtggacaagaatatggaatatcatggtttgctgcaagcgttcagt
cgaaccaaccgagtgttgaacgagaagaaacgttttggtaaaatagtttgtttcagagat
ttgaaaaacaatgttgatacgtctattaaattgttcagcaactctgataatcctgaagat
atagtacgccctccgtttgaaaaagtaaagcaggagtataagagtttggcaactgatttt
ctgcaaaaatatccaacaccaagtagtatagactttctgcaaagcgaaaatgacaagaag
aattttgtgcttgcattccgtgatattatccgtaaacatgcagaaatacagatatacgaa
gattacagcgaggatgctgaagacctcggcatgactgaacaacagtttaacgattataag
agtaaatatcttgatattacagtcgggtttattgacccacctgctgcaccgtcaactgtt
gcggaagatcctgttccatacggaaataaccaaggattggaagatattgatttctgtctt
gagctcttacacagtgacattatcaatgtggcttacattcttgcactaattaatgacctt
gacccttatagtgatgattattctgaaaaacgccagaatatcattgatacaatgattaag
gatgccggaatgcgtggcaaagccaaactcattgacggttttatcaaaaagaatgttgat
gaagacaaggagaatttcatgaacggtcgtaataaggctgacggaacaaacgaattggaa
gaacgattaaaccaatatattgtgtcagaacgcactaaggccgtaaatgatttggctgat
gaagaacagatttcagcggaggtgcttaatcattacatgaaggagtatgactatttacaa
aaagagcagccggagattatacaaaaggcattgaaagagaaacatcttggtcttatcaaa
acccgaaaggctttgacgagaataatggaaagactgcgtagtattataaaaacgtttaat
tgggaataa

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