Bacteroides fragilis BOB25: VU15_05360
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Entry
VU15_05360 CDS
T03897
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bfb
Bacteroides fragilis BOB25
Pathway
bfb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VU15_05360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfb03400
]
VU15_05360
Enzymes [BR:
bfb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
VU15_05360
DNA repair and recombination proteins [BR:
bfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VU15_05360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF7645
Motif
Other DBs
NCBI-ProteinID:
AKA51188
UniProt:
F7LMX9
LinkDB
All DBs
Position
complement(1373357..1374193)
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AA seq
278 aa
AA seq
DB search
MKYIGAHVSASGGVEFAPVNAHEIGANAFALFTKNQRQWVSKPLTEDSIRLFKENCEKFG
FAPEYILPHDSYLINLGHPEEEGLTKSRAAFLDEMQRCEQLGLKLLNFHPGSHLNKISVE
ECLDRIAESINLALEKTKGVTAVIENTAGQGSNLGNEFWQLKYIIDRVEDKSRVGVCLDT
CHTFTAGYDFLNDYDDVFGEFGEVVGFEYLRGMHLNDSKKELGSRVDRHDSIGKGLIGFA
FFEKLMKDPRFDNMPLILETIDETLWPEEIAWLREQTQ
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatatcggagcacatgtcagtgcatcgggaggagtagagtttgctcctgttaat
gcacatgagatcggggccaatgcgttcgccctcttcacaaaaaatcaacgccagtgggtc
agtaagcctctaactgaagatagtattcgtctattcaaagaaaattgtgagaagttcggt
tttgcccccgaatacattctcccacatgacagttatctgatcaatctgggacatcctgag
gaagaaggattaactaaaagtagggctgctttccttgacgaaatgcaacgctgcgaacaa
ctgggattaaaattactgaacttccatccgggaagccatctcaacaagatatcggtagag
gaatgtctggaccgaattgcagaaagtatcaatctggctttggaaaagaccaaaggagta
accgctgttattgaaaacacggcaggacagggaagtaacctgggaaatgaattctggcag
ttgaaatacatcatcgaccgcgtggaagataaaagccgtgtaggagtgtgcctggacacc
tgccacacctttacagccggttatgactttctgaatgattatgatgacgtattcggagaa
ttcggtgaagtggtcggatttgaatatctgcggggaatgcatctcaacgattcaaaaaaa
gaattgggaagtcgtgtagaccgtcacgacagcatcggtaagggattaatcggtttcgct
ttctttgagaagctaatgaaagatccccgtttcgacaacatgccgttgattctggagact
atcgacgaaacactgtggcccgaagaaatagcctggctgagagaacaaactcaataa
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