Bacteroides fragilis BOB25: VU15_05480
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Entry
VU15_05480 CDS
T03897
Name
(GenBank) methionine ABC transporter substrate-binding protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
bfb
Bacteroides fragilis BOB25
Pathway
bfb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VU15_05480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfb03400
]
VU15_05480
DNA repair and recombination proteins [BR:
bfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
VU15_05480
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
DUF8316
DehI
Motif
Other DBs
NCBI-ProteinID:
AKA51212
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All DBs
Position
complement(1403736..1406234)
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AA seq
832 aa
AA seq
DB search
MIYPQNFEQKIGFDQIRQLLKDKCLSTLGEERVNEMNFSDHFEEVDELLNQVAEFVRIIQ
EEDNFPDQFFFDVRPSLKRIRIEGMYMDEQELFDLRRSLETIRDIVRFLQRNDEEESDCP
YPSLKKLAGDITVFPQLITKIDGILNKYGKIKDNASTELSRIRRELANTMGSISRSLNSI
LRTAQSEGYVDKDVAPTMRDGRLVIPVAPGLKRKIKGIVHDESASGKTVFIEPAEVVEAN
NRIRELEGDEHREIIRILTEFSNTLRPSIPEILQSYEFLAEIDFIRAKSHFAIQTNSIKP
SLENEQLLDWTMAVHPLLQLSLAKHGKKVVPLDIELNLKQRILIISGPNAGGKSVCLKTV
GLLQYMLQCGMLVPMHERSHVGLFGSIFIDIGDEQSIEDDLSTYSSHLTNMKIMMKNCNE
RSLILIDEFGGGTEPQIGGAIAEAVLKRFNIKGTFGVITTHYQNLKHFAEDHEGVVNGAM
LYDRHLMQALFQLQIGNPGSSFAVEIARKIGLPEDVIADASEIVGSEYINADKYLQDIVR
DKRYWEGKRQTIRQREKHMEETIARYQAEMEELQKSRKEIIRQAKEEAERLLQESNARIE
NTIRTIKEAQAEKEKTRLVRQELADFRESIDNLTSKEQEDKIARKMEKLKEKQNRKKEKK
QNGTKEQPAVQQTPKATPITEGCPVRIKGQSSVGEVLEINGKNAVVAFGSIKTTVKTERL
ERSNAVPQKQESAKSSFVSNQTQDSMYEKKLNFKQDIDVRGMRGDEALQAVTYFVDDAIL
VGMSRVRILHGTGTGILRTLIRQYLQTIPGVRHFADEHIQLGGAGITVVDLA
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatatatccccagaattttgagcagaaaataggattcgaccaaatcagacaattatta
aaagacaaatgtctcagcacattaggagaagagagagtgaatgaaatgaatttttccgat
cactttgaagaagttgatgaactgctgaatcaggttgcagagtttgttcgcatcatacaa
gaggaagataactttcccgaccaattttttttcgatgtccgtccctctttgaaacgaatc
cgaatagaaggaatgtacatggacgaacaagaattgtttgatctacgacgttcgttggag
accatccgggacatcgtccgtttcctgcagcgcaatgatgaagaagaatcggattgtccc
taccccagcctgaaaaaactggccggtgacataactgtctttccacaacttatcaccaag
attgatggcattttaaataaatatggcaaaatcaaggataatgcttcgaccgaactgtca
cgcatccgacgggaactggctaacacgatgggaagtatctcacgttcgcttaacagcata
ctccgaaccgcacaatccgaaggctatgtggacaaagacgtggcaccaaccatgcgcgac
ggtcgattggttattccggtggctccgggattaaaacgtaaaatcaaaggaatcgtccac
gatgaatcggccagcggaaaaactgtatttatcgaaccagcggaagtagtggaagccaac
aaccgtatccgtgaactggaaggggatgaacaccgggagatcatccgtatcctgactgag
ttctctaacaccctgcgtccttctatcccggaaatactgcaatcgtatgaatttcttgcc
gagatagacttcattcgtgccaaaagtcacttcgccatccaaacaaacagtatcaaaccc
agcctggagaacgagcaattattggactggacaatggccgtacacccactattacaactt
tcgcttgccaaacatggaaagaaagtagtgccattggacatagaactgaacctcaaacag
cgtatccttattatatccggtcccaacgccggaggtaaatccgtatgtctgaaaacagtc
gggttactacaatatatgctgcaatgcggcatgctcgtacccatgcacgaacgaagtcat
gtaggcctgtttggcagtatcttcatcgacatcggtgatgaacaatccattgaagacgat
ttgagtacctattcttcacacttgaccaatatgaaaatcatgatgaagaactgcaacgaa
cgaagtctgattttaattgacgaattcggtggaggtacagaaccccagatcggcggagct
attgccgaagctgtactgaaacgattcaacataaagggtactttcggtgttataactaca
cactaccagaatctaaaacattttgcagaggatcacgaaggtgtagtaaacggtgccatg
ctatatgaccgtcatctgatgcaggcacttttccaacttcagatcggtaatccgggcagt
tcattcgctgtagaaatcgctcgtaaaatcggattaccggaggatgtgatcgcagatgct
tctgagattgtgggaagtgaatatatcaatgccgacaagtatttgcaggatatcgtacgt
gacaaacgttattgggaaggaaagcgtcagactatccgccagcgcgaaaagcatatggaa
gaaaccattgcccgctatcaggctgagatggaagaattacaaaagtcgagaaaagagatc
atccgtcaggcaaaagaggaggcggaacggttgttgcaagaatcaaatgcacgtatcgag
aataccatccgtaccataaaagaggcacaggctgaaaaagaaaaaacacgtctggtacgc
caggaactggcggacttccgtgaatcgatagacaacctgacttccaaggaacaggaagat
aagatagcccgaaagatggagaagctgaaagagaagcaaaaccgcaagaaggagaaaaag
caaaacggcaccaaagaacagccggcagttcagcaaactcccaaagcgactcccatcacc
gaagggtgtccggtacgtatcaaaggacaaagttcggtcggagaagtacttgaaatcaac
gggaagaatgccgtggtagccttcggcagcatcaagacaactgtaaagacggagcggctg
gaacgcagcaacgcagtcccccaaaaacaagagtctgccaaaagttcttttgtcagcaac
cagactcaggacagcatgtacgaaaaaaagctgaacttcaagcaagatatcgatgtacgg
ggaatgcgaggagacgaagctctacaagctgtaacctactttgtagacgacgccatcctg
gtcggtatgagccgggtacgcatcctacatgggaccggtacgggtatcctgcgtaccctt
atccgccaatatttgcaaaccataccgggagtccgccattttgccgacgaacatatccaa
ttgggaggtgcaggtatcacggtagtcgatttggcataa
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