Bacteroides fragilis BOB25: VU15_06540
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Entry
VU15_06540 CDS
T03897
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
bfb
Bacteroides fragilis BOB25
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfb03019
]
VU15_06540
03009 Ribosome biogenesis [BR:
bfb03009
]
VU15_06540
Messenger RNA biogenesis [BR:
bfb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VU15_06540
Ribosome biogenesis [BR:
bfb03009
]
Prokaryotic type
rRNA processing factors
VU15_06540
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
DUF6305
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AKA51395
UniProt:
A0A0K6BSM7
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Position
complement(1657471..1659045)
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AA seq
524 aa
AA seq
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MTSELVVDVQPKEVSIALLEDKSLVELQSEGRNISFSVGNMYLGRVKKLMPGLNACFVDV
GYEKDAFLHYLDLGPQFNSLEKYVKQTLSDKKKLNPISKATLLPDLDKDGTVANTLKVGQ
EVVVQIVKEPISTKGPRLTSEISFAGRYLVLIPFNDKVSVSQKIKSSEERARLKQLLMSI
KPKNFGVIVRTVAEGKRVAELDGELKVLLKHWEESITKVQKATKFPTLIYEETSRAVALL
RDLFNPSFENIYVNNEAVFNEIRDYVTLIAPERAGIVKLYKGQLPIYDNFGITKQIKSSF
GKTVSYKSGAYLIIEHTEALHVVDVNSGNRTKNANGQEGNALEVNLGAADELARQLRLRD
MGGIIVVDFIDMNEAENRQKLYERMCANMQKDRARHNILPLSKFGLMQITRQRVRPAMDV
NTTETCPTCFGKGTIKSSILFTDTLESKIDYLVNKLKIKKFSLHIHPYVAAYLNQGLMSL
KRKWQMKYGFGIKIIPSQKLAFLEYVFYDSHGEEIDMKEEFEIK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
gtgacaagcgaactagtagtagacgtacagcccaaagaagtatccatcgccctacttgag
gacaagagtctggtggaacttcaaagcgaaggaagaaatatttctttttcggtgggcaat
atgtatttaggccgtgtcaagaaattgatgcccggactgaatgcttgcttcgtggatgtc
ggttatgagaaagatgctttccttcattatttagacctgggtcctcaatttaactcactc
gaaaagtacgtaaagcagactttaagcgacaaaaaaaagcttaatcccatttcgaaagca
accctgcttcccgaccttgacaaggatggcactgtagccaatacattaaaggtaggacaa
gaagtagtggtgcaaatcgtaaaggaacctatctctaccaagggaccacgcctgacttcc
gaaatctcgtttgcaggaagatatctggtactgattccttttaatgataaggtttccgtt
tctcaaaaaattaaatcgagcgaagaacgtgcgcgcctgaaacagttactgatgagcatc
aaaccgaaaaacttcggagtgatcgtacgcacagtggcagaaggcaaacgtgttgccgaa
ctcgacggagagcttaaagtattgctgaagcactgggaagaaagtatcaccaaggtacaa
aaggctacaaagtttcctacactgatttatgaggaaaccagccgtgccgtagccttgtta
cgcgaccttttcaatccctcgttcgaaaatatctacgtcaacaacgaagcggtattcaac
gaaatcagggattatgtgacactgattgcccccgaacgggcaggcattgtcaaattatac
aaaggtcagcttcccatttatgacaattttggtatcaccaaacagattaaatcgtctttt
ggtaaaacagtatcctacaagagtggtgcctacctgattattgagcacactgaggcgctt
cacgtagtagacgtgaacagcggtaaccgcaccaagaatgccaacggacaggaaggtaat
gcactcgaagttaacctgggagctgccgatgagttggcacgccagttaagactaagggat
atgggtggtatcattgtggtggatttcatcgacatgaatgaagccgaaaatcgtcagaag
ctttacgaacgtatgtgtgccaatatgcaaaaagacagggcgcgtcacaacattctgccc
ttaagcaaattcggactgatgcaaattacacgccaacgggttcgcccggccatggacgtg
aacactacagaaacctgtccgacttgctttggtaaaggcaccatcaaatcgtccatcctc
tttacggacacactggagagtaaaattgattatctggtcaataaactgaagataaagaaa
ttctcactgcacatccacccgtatgtggctgcttatttgaatcagggacttatgtcgctg
aaacgcaaatggcagatgaaatacggatttggtattaaaattattccgagtcagaaactc
gcttttcttgaatacgtattctacgattcacatggagaagagattgatatgaaggaagaa
tttgagattaaataa
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