Bacteroides fragilis BOB25: VU15_08125
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Entry
VU15_08125 CDS
T03897
Name
(GenBank) RNA polymerase sigma70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfb
Bacteroides fragilis BOB25
Pathway
bfb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VU15_08125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfb03021
]
VU15_08125
Transcription machinery [BR:
bfb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VU15_08125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_ECF
Sigma70_r2
Sigma70_r4
HTH_23
HTH_38
GerE
NNF2_middle
HTH_28
DUF4174
PhyR_sigma2
Motif
Other DBs
NCBI-ProteinID:
AKA51683
LinkDB
All DBs
Position
complement(2076359..2076910)
Genome browser
AA seq
183 aa
AA seq
DB search
MLNDVFILTQIKEGNIKAFETLFRQYYTPLRLYAASITGEPDVAEEIVEELFYVFWKDRE
KLEIFHSVKNYLYRSVRNRSIQYCEHQDVKRRYQDAILSVPVNIASPDPQEQIEYKELQQ
IINRTLEKLPERRLHIFRLHHTEGKKYSEIASLLSLSVKTVEKEMTRALRTLRKEIENYI
QIS
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacgacgtatttatacttactcaaataaaagaaggcaatataaaggcatttgaa
acattattccgccaatattatactccgcttcgcctatacgccgccagcataacgggtgaa
ccggacgtagccgaagaaatcgtcgaagaattgttctatgtattctggaaggatcgggaa
aaacttgagatttttcattctgtcaagaactatctctatcggtctgtacgtaaccgctct
atccagtattgcgaacatcaggatgtcaaaaggcgctatcaggatgcgattttatccgtt
ccggtaaatatagcttcacccgatccgcaagagcagattgagtacaaagaactgcaacaa
attataaaccgaacccttgagaaactaccggagcgccgtttgcatatcttccgactacac
cacacagaaggaaaaaagtattcggaaatagcctctctcctctcactatcggtaaaaaca
gtagagaaagaaatgacccgggcactccggactttacgaaaagaaattgagaattatatc
cagatatcatga
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integrated database retrieval system
