Bacteroides fragilis BOB25: VU15_10995
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Entry
VU15_10995 CDS
T03897
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bfb
Bacteroides fragilis BOB25
Pathway
bfb03420
Nucleotide excision repair
bfb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VU15_10995
03430 Mismatch repair
VU15_10995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfb03400
]
VU15_10995
Enzymes [BR:
bfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VU15_10995
DNA repair and recombination proteins [BR:
bfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VU15_10995
MMR (mismatch excision repair)
Other MMR factors
VU15_10995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
AKA52180
LinkDB
All DBs
Position
complement(2748360..2750720)
Genome browser
AA seq
786 aa
AA seq
DB search
MPDYIEELNESQRAAVLYGDGPSLVIAGAGSGKTRVLTYKIAYLLENGYNPWNILALTFT
NKAAREMKERIARQVGEQRARFLWMGTFHSVFSRILRAEASHIGFTSQFTIYDSADSKSL
IRSIIKEMGLDEKTYKPGSVQARISNAKNHLVSPSGYAANKEAYEGDLAAKMPAIRDIYS
RYWERCRQAGAMDFDDLLVYTYILFRDFPDVLARYREQFRYVLVDEYQDTNYAQHSIVLQ
LTKENQRVCVVGDDAQSIYSFRGADIDNILYFTKIYPDTKVFKLEQNYRSTQTIVRAANS
LIEKNERQIPKEVFSEKERGEAIGVFQAYSDVEEGDIVTNKIAQLRREHDYEYSDFAILY
RTNAQSRVFEEALRKRGMPYKIYGGLSFYQRKEIKDIIAYFRLVVNPNDEEAFKRIINYP
ARGIGDTTVGKIITAATDNNVSLWTALCEPITYGLSINKGTHTKLQDFRALIEQFMADVT
VKNAYEIGTEIIRQSGIINEVCQDNSPENLSRKENIEELVNGMNDFCAMRQEEGNTNVSL
IDFLSEVSLLTDQDSDKEGDGEKVTLMTVHSAKGLEFRNVFVVGMEENLFPSGMAGDSPR
AMEEERRLFYVAITRAEEHCFLSFAKTRFRYGKMEFGSPSRFLRDIDTRFLQLPQEAALG
RSVDEGAGRFRREMEEGYSRRSSSERFSARPSADRPERERPKAQIIAPTVPRNLKKVSGT
TLSPSSASGAGVAGVQPGQTIEHERFGLGEVIRVEGTGDNAKATIHFRNAGDKQLLLRFA
RFKVIE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcccgactatatcgaagaacttaatgaaagccagcgtgcggcggtgctctacggtgat
ggcccttcgctggtcattgccggtgccggttccggaaagacgcgtgtgctcacttataag
atagcctatctgctcgaaaacggttacaatccctggaatatcctggcactgactttcacc
aacaaagctgcccgtgaaatgaaggagcgtattgcccggcaggtgggcgagcagcgtgca
cgattcctttggatgggtacgttccattcggttttttcccgtattcttcgtgccgaggcg
tcccatatcggctttacgtcgcagttcaccatctacgattcggcggacagcaagagcctg
attcgttccatcatcaaagagatggggcttgacgagaagacctataagcccggcagtgtg
caggcacgcatctccaatgcgaagaaccacctggtgtctccttcgggatacgcagccaac
aaggaggcgtacgagggcgatcttgccgcaaagatgcctgccatacgggatatctacagc
cgctactgggagcgttgccggcaggccggagcaatggatttcgatgatctgctggtctat
acctatatccttttccgcgactttcccgacgtgctggcacgctatcgcgagcagttccgc
tatgtgcttgtcgacgagtatcaagacaccaactatgcacagcacagcatcgtgctgcaa
ctgacaaaggaaaatcagcgtgtatgcgtggtgggcgacgacgcgcagagcatctactct
ttcaggggagcggacattgacaatattttgtatttcaccaagatatatcccgataccaaa
gtcttcaagctggagcagaactaccgttccacccagaccattgtccgtgcggccaacagc
ctgatcgaaaagaacgagcggcagatacccaaagaggtgttctccgagaaggaacggggt
gaggccatcggggtctttcaggcttacagtgatgtggaagaaggcgacattgtgaccaat
aaaatagcgcaactgcgtcgcgagcacgattatgaatactccgacttcgccatcctttat
cgtaccaatgcccagagccgtgtcttcgaagaggctttgcgcaaacggggcatgccttat
aagatttacggcggcctctctttctatcagcgcaaggagatcaaagatatcatagcctac
ttccgcctggtggtcaaccccaatgacgaagaggcgttcaagcggattatcaattatccg
gcacgcggcatcggcgataccacggtgggcaagattattactgccgccaccgataacaat
gtcagcctctggaccgcactctgcgaacccattacgtacgggctttccatcaataaaggc
acacataccaaattgcaggattttcgtgcgctgatcgagcagtttatggcagatgtgacc
gtaaagaatgcttatgaaataggtacggaaatcatccgtcagtccggcatcatcaatgaa
gtctgccaggacaattcgcccgaaaatctcagccggaaagaaaacatcgaggaactggtg
aacggtatgaatgatttttgtgccatgcgtcaggaagaggggaacacgaacgtttctctg
atcgactttctctccgaagtatccctgctcaccgatcaggattccgacaaggagggagac
ggcgagaaggtgactctgatgacggtacattctgccaaaggattggagttccgcaacgta
ttcgtggtggggatggaagagaatcttttccccagcgggatggcgggcgattcaccccgt
gcgatggaagaggagcgacgcttgttctatgtagccattacccgtgccgaagagcactgt
ttcctctcgtttgccaaaacccgtttccgttacggtaagatggagttcggcagccccagc
cgtttcttgcgggacatcgacacccgtttcctgcaacttccgcaggaggccgctttaggc
cggagcgtcgacgaaggggccggccgcttccgccgcgagatggaagaggggtattcgcgc
cgttcgtcttccgaacgcttctctgcccgtccgtcggccgaccgtccggaacgcgaacgg
ccgaaggcgcagatcatcgcgccgacggtcccccgtaacttgaaaaaggtaagtgggact
acgctctccccatcgtcggcttccggagccggcgtcgccggcgtacagcccggacagacc
atcgagcacgaacgcttcggcctgggtgaggtgattcgcgtagaaggtacgggcgacaat
gccaaagctaccattcatttccgtaatgcaggcgataaacagctgttgctgcgtttcgcc
agatttaaagtaatagaataa
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