Bacteroides fragilis BOB25: VU15_12815
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Entry
VU15_12815 CDS
T03897
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bfb
Bacteroides fragilis BOB25
Pathway
bfb03030
DNA replication
bfb03430
Mismatch repair
bfb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VU15_12815
03430 Mismatch repair
VU15_12815
03440 Homologous recombination
VU15_12815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfb03032
]
VU15_12815
03400 DNA repair and recombination proteins [BR:
bfb03400
]
VU15_12815
Enzymes [BR:
bfb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VU15_12815
DNA replication proteins [BR:
bfb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VU15_12815
DNA repair and recombination proteins [BR:
bfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VU15_12815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
DUF2095
Motif
Other DBs
NCBI-ProteinID:
AKA52494
UniProt:
A0A0K6BWG7
LinkDB
All DBs
Position
complement(3162723..3163496)
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AA seq
257 aa
AA seq
DB search
MKLNLKNPIVFFDLETTGTNINSDRIVEICYLKVYPNGNEESKTLRINPEMPIPAESSAV
HGIYDADVADCPTFKEVAKSIANDIEGCDLAGFNSNRFDIPVLAEEFLRAGVDIDMSKRK
FVDVQVIFHKMEQRTLTAAYKFYCGRNLEDAHTAEADTRATYEVLMAQLDRYPEELQNDM
SFLADYSSYNKNVDFAGRMVYDDNGVEVFNFGKYKGQSVSEVLKKDPGYYSWILNSDFTL
NTKAMLTKIRLRELTGK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaacctaaagaatcctatcgtcttttttgatctggaaacgaccgggacaaat
atcaactcagaccgaatcgtagaaatctgttatcttaaagtgtatcccaatgggaatgaa
gagtcgaaaactctccgtatcaatcccgaaatgcctatccctgccgaatcatctgctgtt
cacggtatttatgatgctgatgtagccgattgtcctacttttaaggaagtggcaaagagt
attgccaatgatatcgagggttgtgatctggctggtttcaattccaaccgttttgatatt
cccgtgttggcagaagaatttctgcgtgcgggtgtggatatcgatatgagtaagcgcaaa
tttgtcgatgtacaggtgattttccataagatggaacagcgtacccttacggctgcttat
aagttctattgtggccgtaatctggaagatgcgcacacagcggaagctgatacccgtgcc
acgtacgaggtactgatggctcaactcgatcgttatccggaagagttgcagaatgatatg
tctttcttggccgattattcaagctataacaagaatgtggattttgcaggacgtatggta
tatgacgacaatggggtagaggttttcaactttggtaaatacaaaggacagtcggtgagt
gaagtactgaaaaaagatccgggatattacagttggattctgaacagtgatttcacgttg
aatacaaaagccatgttgaccaagattcgtctgcgtgagttaaccggaaaataa
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