KEGG   Bacteroides fragilis BOB25: VU15_13415
Entry
VU15_13415        CDS       T03897                                 
Name
(GenBank) exonuclease
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
bfb  Bacteroides fragilis BOB25
Brite
KEGG Orthology (KO) [BR:bfb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bfb03400]
    VU15_13415
DNA repair and recombination proteins [BR:bfb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     VU15_13415
    Archaeal homologous recombinant proteins
     VU15_13415
SSDB
Motif
Pfam: Metallophos SbcD_C Metallophos_2 Surfac_D-trimer DNA_pol_E_B
Other DBs
NCBI-ProteinID: AKA52602
UniProt: A0A1C0WFC8
LinkDB
Position
complement(3308649..3309881)
AA seq 410 aa
MIRILHTADWHLGQTFFGYDRTQEHEHFLDWLAGVLTKNKIDVLIVAGDVFDVSNPSAAS
QRMFYRFIHRVTTENPRLQLVVVAGNHDSAARLESPLPLLQEMRTEIKGIVRKQNGKIDY
EHLLVELKNAAGEVEALCLAVPFLRQGDYPVVETEGNPYAEGVKELYARLLKYALKKRTD
GQALVAVGHLLATGSEIAEKDHSERIIIGGLESVSPESFPEQIVYTALGHIHKAQRVSGR
ENIRYAGSPLPMSFAEKHYHHGVVKVTLDEGWAVEIEKLEYTPLVRLLSIPATEAAAPDE
VLDELRGLELPEDEPMPYLEVKVKLSEPEPMLRQQVEEILEGKPVRLARIVSFYRQAAEG
SVEEEVLTAGLQEMNPLQIVKATFENSYQTEMPEELVNLFQEACRTINLE
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgatacgtatactacatacagccgattggcatttgggacaaacctttttcgggtatgac
cgcacgcaggaacacgaacattttctggactggctggccggtgtcctcactaagaacaag
attgatgtactgattgttgccggagatgtctttgatgtttccaatccgtctgctgcttcc
cagcggatgttctatcgtttcattcacagggtgacgactgagaatccgcgattgcagttg
gttgttgtggccggcaatcacgattcggccgcccggctggaatctcctctgcctttgttg
caggagatgcgtacggagattaaaggaattgtccgtaaacagaatggcaaaatagattat
gagcatttactggtagaattgaagaatgcggcgggggaggtagaagccctatgcctggcg
gtacctttcttgcgacagggagactatccggtggtagagactgaaggcaatccgtatgcg
gaaggggtgaaggaactgtatgcccgtttgttgaaatatgcgttgaagaagcggactgac
ggacaggcattggtggctgtcggacacctgctggcaaccggttcggagattgccgagaaa
gatcatagtgagcgcatcatcatcggtggtctggagagtgtatcgcccgagtcttttccc
gaacagattgtttatacggctttagggcatatccacaaggctcagcgcgtatcgggcagg
gagaatatccgttatgccggcagtcccttacctatgtcgtttgccgagaagcattatcac
cacggagtggtaaaagtgaccctagatgaaggttgggcggttgagatagagaaacttgaa
tatactccgttggtgcgtttgctaagtatccctgccacagaagctgcggctccggacgag
gtgctggatgaattgcgcgggctggaactaccggaagatgaaccgatgccctatctggaa
gtcaaggtgaaactaagcgaaccggagccgatgttgcggcagcaagtggaagaaatactg
gaaggcaagccggtccggctggcccgtatcgtttctttctatcggcaggcggcagagggg
agcgtggaagaagaagtcctgaccgccggattgcaggagatgaatcccttacagattgtg
aaagcaacctttgagaacagttaccagacggagatgccggaagaactggtaaatttgttc
caggaggcttgccggaccatcaatttagaatga

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