Bacteroides fragilis BOB25: VU15_13980
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Entry
VU15_13980 CDS
T03897
Name
(GenBank) RNA polymerase sigma70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfb
Bacteroides fragilis BOB25
Pathway
bfb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VU15_13980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfb03021
]
VU15_13980
Transcription machinery [BR:
bfb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VU15_13980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_38
Sigma70_r4
HTH_40
Sigma70_ECF
HTH_23
HTH_11
PF0610-like_N
HTH_10
HTH_29
HTH_20
HTH_24
HTH_36
Poty_coat
wHTH_Par
HTH_5
DUF2774
HTH_7
RPA_C
Motif
Other DBs
NCBI-ProteinID:
AKA52704
LinkDB
All DBs
Position
complement(3458283..3458843)
Genome browser
AA seq
186 aa
AA seq
DB search
MKFIRKFPVADADSLESPQKFEDFFLDYYPRVKGFINGLLQDAEEAEDLSQDIFMSLWQN
RGNLKQIDNLDAYLFRIARNAVFRYIERSLLFKNYQSRQLSDDNSDLYEIESELNAKELE
LIIAIAVERMPSQRRKIYQMSREQGLSNENIARELNISKRTVENHLTQALADIRKILFWV
IMATFV
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcataaggaagtttccggtggccgatgcggatagtctggaaagtccccaaaag
tttgaggacttctttcttgattattatccccgggtcaaaggattcattaatggcttgtta
caggatgctgaagaggcggaagatctttcgcaggatatatttatgtcattgtggcagaac
cggggaaatctgaagcagatagacaacttggatgcatacctgttccgtatagcccggaat
gcggttttccggtacatcgagcgctctttgttatttaaaaattatcaatccaggcagtta
tcggatgataactccgatctgtatgaaatagaatcggaactgaacgcgaaagaattagaa
ctgattatagccatcgctgttgaaagaatgccctctcaaagaagaaagatttatcagatg
agccgcgaacaggggcttagtaatgaaaatatagctcgtgaactgaacattagcaagcgt
actgttgagaatcatctgacccaggctttggctgatatacgtaagatattgttttgggtc
atcatggctactttcgtataa
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integrated database retrieval system
