Bacteroides fragilis BOB25: VU15_14775
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Entry
VU15_14775 CDS
T03897
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
bfb
Bacteroides fragilis BOB25
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfb03000
]
VU15_14775
Transcription factors [BR:
bfb03000
]
Prokaryotic type
Helix-turn-helix
LacI family
VU15_14775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_24
HTH_23
HTH_38
HTH_11
MarR_2
MarR
HTH_Tnp_ISL3
HTH_7
HTH_28
HTH_3
HTH_5
Sigma70_r4_2
HTH_AraC
HTH_10
HTH_Crp_2
HTH_IclR
HTH_AsnC-type
Fe_dep_repress
HTH_29
AbiEi_4
HTH_Tnp_1
HTH_36
TnsD
HTH_Tnp_Tc3_2
HTH_26
HTH_17
HTH_8
Phage_terminase
Sigma70_r4
MerR
CENP-B_N
Sigma54_DBD
Cro
HTH_31
HTH_1
TetR_N
HTH_20
IF2_N
Xre-like-HTH
GerE
Motif
Other DBs
NCBI-ProteinID:
AKA52840
UniProt:
A0A0K6BWB1
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All DBs
Position
3616177..3617187
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AA seq
336 aa
AA seq
DB search
MSKPQITIKDIARELGVSPSTVSRALKDNPDISQETRDAIHKYAREHNYKPNVLALNLRT
SRSNTIGVIIPQLVHHFFSCVLSGIERTAAEAGYNILVAQSNEEYEREVKIVHSFLAARV
CGVITSLAKDTSRYDHYQELLDNNIPIVFYDRICTGINTERVVVDDYAGSFAAVEYMIQT
GCKRIFFYSAAPHLEISKNRRNGYMDAMKKYRIPVDQSMIKLCDSREKAIAITPALLERP
DHPDGFFAINDETASGILYSCKLTGRKVPDEVSICGFTDGAIAQSTDPKLTTVEQHGEEV
GKSTIRLLIDKLEGNDEGKSGNKIVRTNLVVRGTTK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgcaaatcaccatcaaagacattgcccgcgaactgggggtatcgccctcc
accgtatcgagagcactgaaggacaatccggacatcagccaggagacgagggatgctata
cataagtacgcgcgcgaacataattataagcccaacgtactggcactgaacctgcgcacc
agccgttcgaacaccatcggggtcatcatcccccagttagttcaccacttcttttcgtgt
gtgctgagcggcattgagagaacggcggcggaagcgggctacaacatcctggtggcgcaa
agcaacgaggagtacgagcgagaggtaaaaatcgttcactccttcctcgccgcacgggtt
tgcggagtcatcacttcgctcgccaaagacacatcccgatatgaccattaccaggaattg
ctggacaacaatattcctatcgttttctacgatcgcatctgtaccggtatcaacaccgaa
cgggtggtggtagacgattatgccggttcgtttgccgccgtggagtatatgatacagacg
ggctgcaagcgcatcttcttttatagcgccgctccccacctcgaaatatcgaaaaaccgg
cggaacggttatatggacgcgatgaaaaagtatcggattccggtggaccaaagcatgata
aagttatgtgacagccgcgaaaaagcgatcgccatcacacccgctctgctcgaaaggccg
gatcatccggacggcttcttcgccatcaatgacgaaacagcttcgggcatcctctactcg
tgcaaactgaccggacggaaagtgcccgacgaagtgtctatctgcggattcaccgacggc
gccatcgcccaaagcacagatccgaagctgaccacggtggagcaacatggcgaagaggtg
ggcaaaagcaccatcaggctactgatagacaaactggaagggaacgatgaaggaaaaagc
ggtaataaaatcgtgcgtaccaacttagtggtacggggaacgacgaaataa
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