KEGG   Bacteroides fragilis BOB25: VU15_16965
Entry
VU15_16965        CDS       T03897                                 
Name
(GenBank) RNA polymerase sigma70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfb  Bacteroides fragilis BOB25
Pathway
bfb02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bfb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VU15_16965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfb03021]
    VU15_16965
Transcription machinery [BR:bfb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     VU15_16965
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF GerE Sigma70_r4 SopA HTH_40 Phage_Repressor_c Mycobacteriophage_Gp53 PhyR_sigma2 DUF3741 FAM237_M TnsD HTH_24 HTH_10 HTH_23 HTH_11
Other DBs
NCBI-ProteinID: AKA53227
LinkDB
Position
complement(4155690..4156262)
AA seq 190 aa
MKENTMYSNLESVEQLFRQYYKVLRVYAFRFVNDWDIAEDVVQDVFVALWNKRTDIEFDG
AVKAYLFKAVYNKSLNILSSKKYTEEESVEQFSDQIEALQILENNQENSLFMKELQGEIE
TFIETLPTQVKKVFILSRSYGLKIKEISVQLDLSPKTVEKYLTRALLELRTHLKNKDLMS
LLFLLYLCSK
NT seq 573 nt   +upstreamnt  +downstreamnt
atgaaggaaaatacaatgtattcgaatcttgaatcggtagaacaattatttcggcaatat
tataaggtgttgcgggtatatgcgttccgttttgtgaatgattgggatattgcagaagac
gtagtgcaggatgtttttgttgctttatggaataaacgtacagatattgaatttgatggc
gcggtaaaagcctatctttttaaggctgtctataataaatcgcttaatatcctttccagt
aagaaatataccgaagaagaatccgtagaacaattttccgatcaaatcgaagcactgcaa
attctggagaataatcaggaaaactcgttgttcatgaaagaactccagggtgaaattgaa
acttttatcgaaacacttcctacgcaagtaaaaaaggtatttatattaagtagaagctat
ggtctgaaaataaaggaaatctccgttcagctcgatctttctccaaaaaccgtagaaaag
tatttgacccgtgctttgttggaactacgtactcatcttaaaaacaaggatttaatgagt
cttttattcttgctttatctctgctctaaataa

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