Bacteroides fragilis BOB25: VU15_18065
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Entry
VU15_18065 CDS
T03897
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bfb
Bacteroides fragilis BOB25
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfb03009
]
VU15_18065
Enzymes [BR:
bfb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
VU15_18065
Ribosome biogenesis [BR:
bfb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VU15_18065
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AKA53420
UniProt:
A0A0K6BYU1
LinkDB
All DBs
Position
complement(4426444..4427844)
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AA seq
466 aa
AA seq
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MSTENEEWREDSKSENTDAGRDGNRSFNREGGYSRPSYNREGGDRPYRPRFNSNSEDRPQ
RSYGDRPQRPSYNREGGDRPYRPRFNSEGGDRPQRSYGDRPQRPSYNREGGDRPYRPRFN
SEGGDRPQRSYGDRPQRPSYNREGGDRPYRPRFNSEGGDRPQRSYGDRPQRPSYNREGGD
RPYRPRYNNDNRSQGFSRPIRRTGDYDPNAKYSKKKQIEYKEQFVDPNEPIRLNKFLANA
GVCSRREADEFITAGVVSVNGEVVTELGTKIKRADVVKFHDETVSIERKVYVLLNKPKDC
VTTSDDPQARLTVMDLVKGACAERIYPVGRLDRNTTGVLLLTNDGDLASKLTHPKYLKKK
IYHVYLDKNLTKADMDQIAAGIQLEDGEIHADAISYSDEVKRDQVGIEIHSGKNRIVRRI
FESLGYKVVKLDRVFFAGLTKKGLRRGEWRYLTEQEVNFLRMGSFE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagaaaacgaagaatggcgcgaagactccaagagtgagaatacggacgccggc
cgtgatggtaacagaagttttaacagagaaggcggatacagtcgtccttcatacaatcgt
gaaggtggcgaccgtccttatcgtccgagatttaatagtaatagtgaagatcgtcctcag
cgttcttatggtgatcgtccgcaacgtccttcatataatcgtgaaggtggcgaccgtccc
tatcgtccgcgttttaacagcgagggtggtgaccgtcctcagcgttcctatggcgaccgt
ccgcaacgtccttcatataatcgtgaaggtggtgaccgtccctatcgtccgcgttttaac
agcgaaggtggtgaccgtcctcagcgttcttatggcgaccgtccgcaacgtccttcatat
aaccgtgaaggtggcgaccgtccctaccgtccgcgctttaacagcgaaggtggtgatcgt
cctcagcgttcctatggcgaccgtccgcaacgtccttcatacaatcgtgaaggcggtgac
cgtccctatcgtccgagatacaataacgataacagatcgcagggattctcacgtccgata
cgtcgtacgggggattacgatccgaatgctaaatacagtaagaaaaaacagattgaatac
aaagaacaatttgttgatccgaatgaaccgatccgtctgaataagtttctggctaatgca
ggggtctgctctcgtcgtgaagctgatgaatttatcacggcaggtgtagtttctgtcaat
ggagaggttgttacagagttgggtacaaagatcaagcgcgctgatgtggtgaagtttcac
gatgaaaccgttagtattgagcgtaaggtgtatgtgttgctgaacaagccgaaagattgt
gtaactacttcagatgatcctcaggctcgtctgactgttatggatctggtaaaaggggcc
tgcgctgagcgtatttatccggtaggacgtctggaccgtaacacaacaggtgtattgctg
ttgactaatgatggtgatttagcttctaaactgacacatccgaaatacctgaagaaaaaa
atctatcatgtatatttggataagaatctgactaaggcagatatggaccagattgcagcc
ggtattcagctggaagatggtgaaatccatgcggatgccatcagttattctgacgaggtg
aaacgtgatcaagtgggtatcgaaatccactccggaaagaatcgtatcgtccgtcgtata
tttgaatcgttgggttacaaggtggtgaaacttgaccgtgtattctttgccggactgact
aaaaaaggattgcgccgtggtgagtggcgttatcttacagaacaggaagttaacttcctc
cggatgggatcttttgaataa
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