Bacteroides fragilis BOB25: VU15_19780
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Entry
VU15_19780 CDS
T03897
Name
(GenBank) RNA polymerase sigma70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfb
Bacteroides fragilis BOB25
Pathway
bfb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VU15_19780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfb03021
]
VU15_19780
Transcription machinery [BR:
bfb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VU15_19780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
TnsD
Mycobacteriophage_Gp53
HTH_24
HTH_40
DUF7645
HTH_23
LIN14_BEN
Motif
Other DBs
NCBI-ProteinID:
AKA53706
LinkDB
All DBs
Position
complement(4799173..4799721)
Genome browser
AA seq
182 aa
AA seq
DB search
MVDFEQFYITWYSRAKYFAREYVHSESDAENIIQDVFLHLYERRDLMDAYTNLTAYLFTS
IKNRCLDYLRKWVLEQETAQGVQDEFDMELRIKYDSLEIFNTQFSDETDIGELLDNALQK
LPERCRNIFIMNKLEGKKQKEIAEELNLSINTVESQMGIAYKKLREELKDCLPLFIFLFA
IS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggtggacttcgaacaattttatatcacatggtattcgcgcgcgaaatattttgcgcgc
gaatatgttcattctgaaagtgatgctgagaatattattcaagacgtttttttgcatctg
tacgagaggcgtgatttgatggatgcatatacaaatctgactgcttatctttttacttct
atcaaaaacagatgtttggactatttgcgcaaatgggttcttgaacaagaaactgcacag
ggagtgcaagatgaatttgatatggaacttcggatcaaatatgattctttggagatattt
aatacgcagttttctgatgaaactgatataggagagttgttggacaatgcactccagaaa
cttccggaacgatgtcgcaacatttttataatgaataagctggaagggaaaaaacaaaaa
gaaattgcagaagaattgaatttgtctatcaataccgtagagtcgcagatgggcattgct
tacaagaaattacgtgaagaattaaaggattgcctgcctctatttatatttttgtttgct
atttcctga
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integrated database retrieval system
