KEGG   Bacteroides fragilis BOB25: VU15_20485
Entry
VU15_20485        CDS       T03897                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
bfb  Bacteroides fragilis BOB25
Brite
KEGG Orthology (KO) [BR:bfb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bfb03032]
    VU15_20485
   03036 Chromosome and associated proteins [BR:bfb03036]
    VU15_20485
   03400 DNA repair and recombination proteins [BR:bfb03400]
    VU15_20485
DNA replication proteins [BR:bfb03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    VU15_20485
Chromosome and associated proteins [BR:bfb03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    VU15_20485
DNA repair and recombination proteins [BR:bfb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      VU15_20485
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 VWA_3
Other DBs
NCBI-ProteinID: AKA53826
UniProt: A0A0K6C0E1
LinkDB
Position
complement(4976863..4977135)
AA seq 90 aa
MNKAELINAMAAESGLSKVDSKKALEAFFSSVTKALSAGDKISLVGFGTFSVAERSARMG
INPSTKKAIEIPAKKVAKFKPGAELTDAIK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaggctgaacttattaatgcaatggcagcggaatccggcttgagtaaagtggat
tctaagaaagcgcttgaagctttcttttcttcggttacaaaagctttgtcggctggtgac
aaaatttccttggttggatttggtacattctctgtagctgaaagatcagcaagaatggga
atcaatccttctaccaagaaggcaattgagattcctgcaaagaaagttgctaaatttaaa
ccgggtgctgagctgacagatgctataaaataa

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