Bacteroides fragilis BOB25: VU15_20510
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Entry
VU15_20510 CDS
T03897
Name
(GenBank) preprotein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
bfb
Bacteroides fragilis BOB25
Pathway
bfb02024
Quorum sensing
bfb03060
Protein export
bfb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VU15_20510
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VU15_20510
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VU15_20510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bfb02044
]
VU15_20510
Secretion system [BR:
bfb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VU15_20510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
AKA53831
UniProt:
A0A5C6L8Z9
LinkDB
All DBs
Position
4980850..4983873
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AA seq
1007 aa
AA seq
DB search
MQNKGFVKVFAVLLTLVCVFYLSFSFVTRHYTNKAKEFAKGDVKVEQDYLDSLSNEKVWL
GNYTLKQCREMEISLGLDLKGGMNVILEVSVPDVIKALADNKPDEAFNKALAEAAKQATT
SQDDVITLFIKEYHKVAPGAKLSELFATQQLKDKVNQKSSDAEVEKVLREEVKAAVTNSY
NVLRTRIDRFGVVQPNIQSLEDKMGRIMVELPGIKEPERVRKLLQGSANLEFWETYNAKE
VAPYLQAADSKLRAVLAHEATVNDTVAAVDSTALAAAEATPDKAVSAADSLAAALKGGEK
KQQASSADLEQLKKEHPLLAILSVNPNGGPVVGYANYKDTATVNSYLAMKEVAAELPKDL
RLKWGVSPFEYDPKGQTFELYAIKSTERNGKAPLEGDVVTDAKDDYDQYGKPSVSMSMNS
DGARRWALLTKQNINKSIAIVLDNYVYSAPNVSNEITGGNSQITGHFTPEQAKDLANVLK
SGKMPAPAHIVQEDIVGPSLGQESINAGIFSFVVALILLMIYMCSMYGFIPGMIANGALV
LNFFFTLGILSSFQAALTMSGIAGMVLSLGMAVDANVLIYERTKEELRSGKGVKKALADG
YSNAFSAIFDSNLTSIITGIILFYFGTGPIRGFATTLIIGILCSFFTAVFMTRLVYEHFM
SKDKLLNLTFTSPISKKMLVNTHFDFMGGNKKWLTITGVILLICIGSLVTRGLSQSIDFT
GGRNFKVQFENPIEPEQVRELISNKFGDANVSVISIGTDKKTVRISTNYRIQDEGNNVDS
EIESYLYEALKPMLTQNITLATFIDRDNHTGGSIISSQKVGPSIADDIKTSAIWSVVFAL
VAIGLYILIRFRNIAYSAGSVAALTSDTLMILGAYSLCWGWMPFSLEIDQTFIGAILTAI
GYSINDKVVIFDRVREFFGLYPKRNVKQLFDDSLNTTLARTINTSLSTLIVLLCIFILGG
DSIRSFAFAMILGVVIGTLSSLFVASPIAYMMLKNKKGSAPATTTEE
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaaaggatttgtaaaggtttttgcggtattactcacgctggtatgcgtgttc
tacctctctttctccttcgtgactcgccattataccaataaggcaaaagagtttgcgaaa
ggcgacgtgaaggtagagcaggattacctcgactctctctccaacgagaaagtatggttg
ggtaactatacgctgaaacagtgtcgtgaaatggaaatcagtttaggtctggaccttaag
ggaggtatgaacgttatcctcgaagtgtctgtacccgatgttatcaaagcattggctgac
aacaagcccgacgaagctttcaacaaagcactggccgaagctgccaaacaggcaaccacc
agccaggacgacgtgatcacactgtttattaaagagtatcacaaagttgcaccgggtgcc
aaactctctgaactcttcgcgacacaacagctcaaagacaaagtaaaccagaaatcatca
gacgccgaagttgaaaaggtgctgagagaagaagtaaaagctgccgtaacgaactcatac
aacgtgcttcgtacacgtatcgaccgctttggtgtggttcagcccaacatccagagcctc
gaagacaaaatgggacgtatcatggtggaacttccgggtatcaaagaacccgaacgtgta
agaaagctgcttcagggatcggctaacctcgaattctgggaaacatacaacgccaaggaa
gtagctccttacttgcaagctgccgactctaaactccgcgcagtcctggcacacgaagct
accgtcaacgatacagttgccgcagtagattcaaccgccttggctgcagcagaagctact
cccgataaagcagtcagcgctgccgacagccttgctgccgcactgaaaggcggagaaaag
aaacagcaggcttcttctgccgatctggaacaactgaagaaagagcatccgctactggct
atcctgagtgtaaatccgaacggaggccctgtggtaggttatgcaaactataaagataca
gcgactgtcaattcatacctcgctatgaaagaagtggctgccgagttgccgaaagatctt
cgcctgaaatggggtgtttctccgttcgaatacgatccgaaaggacagacttttgaattg
tatgccatcaaatcaaccgaacgtaacggtaaagcaccgctcgaaggtgacgttgtaacc
gatgccaaagacgactatgaccaatacggcaaaccgtctgtaagcatgtcgatgaactct
gacggcgcacgtcgctgggcattgctgaccaagcagaacatcaataagtccatcgccatc
gtattggataattatgtatattccgctccgaacgtaagtaacgagattacaggtggtaac
tcacagatcaccggccactttactccggaacaggcaaaggacttggctaacgtattgaag
tccggtaagatgccggctcctgcacacatcgttcaggaagacatcgtcggtccgtcactg
ggtcaggaatctatcaatgcaggtatcttctcattcgttgtcgctctgatcctgttgatg
atctatatgtgctctatgtacggattcatcccgggtatgattgccaacggcgctttggta
ctgaacttcttcttcacactgggtatcctttcatctttccaggctgcgctgaccatgtca
ggtattgccggtatggtgttgtcactcggtatggcggtggatgcgaatgtgttgatctac
gaacgtaccaaagaagagcttcgtagcggcaaaggcgtgaagaaagcattggcggacggt
tactcaaatgccttctctgctatcttcgactccaacttgacttctatcatcaccggtatc
atcctgttctatttcggtacaggtccgatccgtggtttcgccacgactctgatcatcggt
atcctctgttcattctttacagccgtgttcatgacccgtctggtttacgaacacttcatg
agcaaagacaaactgctgaatctgacatttacttcacctatctctaagaagatgctggta
aatacacacttcgactttatgggtggcaacaagaaatggctgactatcacaggcgtgatt
ttgctgatctgtatcggttcgctggtaacccgcggtttgagccagagtatcgacttcacc
ggtggacgtaacttcaaggttcagttcgaaaatccgatcgaaccggaacaggtacgtgag
ctgatctctaacaagttcggtgatgccaacgtaagcgttatctctatcggtaccgataag
aagactgtacgtatcagtaccaactaccgtattcaggacgaaggtaacaatgtagactct
gaaatcgaatcttacctgtacgaagcattgaaaccgatgctgactcagaacatcacactg
gctacattcatcgaccgcgataaccatacgggcggcagtatcatcagttcacagaaagta
ggtccgagtatcgctgacgatatcaagacttcagccatctggtcggttgtattcgctctg
gttgctatcggtctttatatcctgatccgcttccgtaacatcgcttacagtgcgggttct
gtagcagcactgaccagtgatacactgatgatcttaggtgcttactcactgtgctggggc
tggatgccgttctctctggagatcgaccagactttcatcggcgctatcctgactgctatc
ggttactcaatcaacgataaggtggtaatcttcgaccgtgtgcgtgaattcttcggcctg
tatccgaaacgcaacgtaaaacagttgtttgatgactctctgaacacaactctggcacgt
accatcaacacctctttgagtacattgatcgtgttgctgtgtatcttcatcctgggtggt
gactctatccgcagcttcgccttcgcaatgatcctgggtgttgtcatcggtacactgtca
tctctgttcgtagcttctccgattgcatatatgatgctgaaaaacaaaaaaggttcggca
cctgcaactactacagaagaataa
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