KEGG   Bacteroides fragilis BOB25: VU15_20770
Entry
VU15_20770        CDS       T03897                                 
Name
(GenBank) RNA polymerase
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfb  Bacteroides fragilis BOB25
Pathway
bfb02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bfb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VU15_20770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfb03021]
    VU15_20770
Transcription machinery [BR:bfb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     VU15_20770
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 GerE Sigma70_ECF UPF0122 HTH_23 PF0610-like_N HTH_24 HTH_11 HTH_20 HTH_40 HTH_28 HTH_5 HTH_38 HTH_AsnC-type VF530 HTH_10 DUF722 HTH_29 PCI HTH_Tnp_ISL3 HTH_Mga DUF8612 DUF8040
Other DBs
NCBI-ProteinID: AKA53873
LinkDB
Position
5063731..5064282
AA seq 183 aa
MNEKEAIIKLKTCNDKAAFAFLYRSYWAKVYNFTRLYITSAVDVEEIVQEVFIKIWENRE
ALDEEQNFAGYLFITMRNLVFNRSRKNLNEPFYQLSVIEAVEESYDIEEELDAANLRTHI
SALISMLPPRQQEVFRLSRDEELSYREIAERLQISERTVEHHISDALKFLRKNIKLYLLF
LSL
NT seq 552 nt   +upstreamnt  +downstreamnt
atgaacgaaaaagaagcaattattaaactaaagacctgcaatgataaagccgcctttgca
ttcctctatcgctcttattgggctaaggtttacaattttacgcgactttacatcacctct
gcggtcgatgtggaagaaatcgttcaagaagtttttattaaaatttgggagaatcgggaa
gctttggatgaagaacaaaattttgccggatacttatttatcacgatgcgcaaccttgtt
ttcaaccgttcccgtaagaatctgaatgaacccttctaccaactatcagtgatagaagct
gtcgaagaatcatacgatatagaagaagaattggacgcagccaatctgcgcacacatatc
tcagcactgatctcaatgctgcctccccggcagcaggaagtgtttcgtttaagcagggat
gaggaactttcttatcgcgaaattgcagaaagactacaaatatcagaaagaacagtggaa
caccacatctccgatgccctaaagtttctacgaaaaaacatcaaactctatttactgttc
ctttcattataa

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