Bacteroides fragilis BOB25: VU15_21415
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Entry
VU15_21415 CDS
T03897
Name
(GenBank) pyridine nucleotide-disulfide oxidoreductase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
bfb
Bacteroides fragilis BOB25
Pathway
bfb00010
Glycolysis / Gluconeogenesis
bfb00020
Citrate cycle (TCA cycle)
bfb00260
Glycine, serine and threonine metabolism
bfb00280
Valine, leucine and isoleucine degradation
bfb00310
Lysine degradation
bfb00380
Tryptophan metabolism
bfb00620
Pyruvate metabolism
bfb00630
Glyoxylate and dicarboxylate metabolism
bfb00640
Propanoate metabolism
bfb00670
One carbon pool by folate
bfb00785
Lipoic acid metabolism
bfb01100
Metabolic pathways
bfb01110
Biosynthesis of secondary metabolites
bfb01120
Microbial metabolism in diverse environments
bfb01200
Carbon metabolism
bfb01210
2-Oxocarboxylic acid metabolism
bfb01240
Biosynthesis of cofactors
Module
bfb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bfb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bfb_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
bfb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
VU15_21415
00020 Citrate cycle (TCA cycle)
VU15_21415
00620 Pyruvate metabolism
VU15_21415
00630 Glyoxylate and dicarboxylate metabolism
VU15_21415
00640 Propanoate metabolism
VU15_21415
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VU15_21415
00280 Valine, leucine and isoleucine degradation
VU15_21415
00310 Lysine degradation
VU15_21415
00380 Tryptophan metabolism
VU15_21415
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VU15_21415
00670 One carbon pool by folate
VU15_21415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfb04147
]
VU15_21415
Enzymes [BR:
bfb01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
VU15_21415
Exosome [BR:
bfb04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
VU15_21415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
NAD_binding_8
DAO
HI0933_like
FAD_binding_3
FAD_oxidored
GIDA
AlaDh_PNT_C
FAD_binding_2
Thi4
Trp_halogenase
3HCDH_N
Lycopene_cycl
2-Hacid_dh_C
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-ProteinID:
AKA53987
UniProt:
A0A2M9VB16
LinkDB
All DBs
Position
5228277..5229620
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AA seq
447 aa
AA seq
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MKYQVIIIGGGPAGYTAAEAAGKAGLSVLLFEKQNLGGVCLNEGCIPTKTLLYSAKTYDG
AKHASKYAVTVPEVSFDLPKIIARKSKVVRKLVLGVKSKLTSNNVTIISGEATILDKNTV
RCGEETYECDNLILCTGSETFIPPIPGIDSVNYWTHREALDNKELPASLAIVGGGVIGME
FASFFNSLGVKVTVIEMMDEILGGMDKELSALLRADYAKRGIQFLLSTKVVSLAQTEEGA
VVSYEKAEGAGSVIAEKLLMSVGRRPVTKGFGLENLNLQRTERGSIVVNGQMESSLPGVY
VCGDLTGFSLLAHTAVREAEVAVHAILGKEDRMSYAAIPGVVYTNPEIAGVGQTEESLTA
KGIAYRAVKLPMAYSGRFVAENEGVNGVCKVLLGEDDTILGAHVLGNPASEIITLAGMAV
EMKLKAAEWKKIVFPHPTVAEIFREAL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaataccaggttattattatcggtggagggcctgccggctatacggctgctgaggct
gccgggaaagcaggactgagtgtgttgctttttgagaaacaaaatttaggaggtgtctgt
ctgaacgaagggtgtatcccgacaaaaacgttactctattcggctaaaacctatgatggt
gctaaacatgcgtcaaaatatgctgtaacggttccagaggtctcttttgatcttcctaag
atcattgctcgtaaatcgaaggtggtacgtaaactggttttaggggtaaaatcgaagtta
acgtccaataatgttactattataagtggagaggcaaccattttggacaagaatacggtt
cgttgcggtgaagaaacttatgaatgtgataacttaattctctgtacaggttccgaaact
tttattcctcctattcccggaatcgatagtgtaaactattggacacatcgtgaagcatta
gacaataaggagttgccggcttcacttgccattgtgggcggtggagtgatcggtatggag
tttgcgtcctttttcaatagtctgggtgtgaaggtgaccgttattgagatgatggatgaa
attctgggaggcatggataaagagctttccgccctgttgcgtgccgactatgcaaagcgg
ggcattcagttcctgttaagtaccaaagtcgtttcattggcacagacggaagaaggtgct
gtggtttcttatgaaaaggccgaaggggcaggaagcgtgattgccgaaaagctattaatg
agtgtgggacgtcgtccggtgacaaaaggctttgggcttgagaaccttaacctgcaacgg
acagaacgtggaagtattgtagtgaacgggcaaatggaaagctcgttacccggagtctat
gtttgcggtgatttaaccggattctccttattggcacatactgctgtccgtgaagcagaa
gtagccgtacatgcaattcttggaaaagaagataggatgagttatgccgctatccccggg
gtagtttatactaatcctgaaatagccggtgtcgggcagacagaagaatctctgactgca
aaaggcattgcttaccgtgccgtaaaacttcccatggcatattccggacgttttgttgct
gagaatgaaggagtgaatggagtatgtaaggtgctacttggcgaggatgatactattttg
ggagcacatgttttgggtaatcctgcttctgagattatcacgttggcagggatggctgta
gaaatgaaactgaaggcagccgagtggaagaagattgttttcccacatcctacggttgcc
gagattttccgtgaagcattataa
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