KEGG   Bacteroides faecium: BacF7301_11950
Entry
BacF7301_11950    CDS       T08751                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
bfc  Bacteroides faecium
Pathway
bfc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bfc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BacF7301_11950 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bfc03019]
    BacF7301_11950 (rny)
Messenger RNA biogenesis [BR:bfc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BacF7301_11950 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 AAA_15 KH-I_KHDC4-BBP Cas3_HD
Other DBs
NCBI-ProteinID: QIU94811
UniProt: A0A6H0KP59
LinkDB
Position
complement(3378738..3380273)
AA seq 511 aa
MIAIIATAIACFIVGGVFSYILFRYALKSRYENVLKEAETEAEVIKKNKLLEVKEKFLNK
KADLEKEVALRNQKIQQAENKLKQREMVLGQRQEEIQRKKMEAEAVKENLEAQLVIVDKK
KEELDKLQQQEIDKLEAISGLSAEEAKERLVESLKEEAKTQAQSFINDIMDDAKLTANKE
AKRIVVQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVAKVRKQVEEEIIETGKRTTID
LGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHD
IGKVPDEEPELPHALLGMKLAEKYKEKPDICNAIGAHHDETEMTSLLAPIVQVCDAISGA
RPGARREIVEAYIKRLNDLEQLAMAYPGVTKTYAIQAGRELRVIVGADKIDDKQTENLSG
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgatagcaataatagcaacagcaattgcttgcttcatcgtaggtggagtcttttcatac
atactattccggtatgctctgaaatccagatacgagaatgtcctgaaagaagcagagacg
gaagcggaagtaattaagaaaaacaagctgctggaagtgaaggagaagttcctgaacaaa
aaggcagaccttgaaaaggaggtagccctgaggaatcagaagattcagcaggcggaaaac
aaactgaaacaacgcgaaatggtgctcggacagcgccaggaagaaatccagcgcaagaag
atggaagccgaagctgtcaaagagaacctggaagcgcagttggtgattgtcgacaagaag
aaagaagaactggataaactgcaacaacaggaaattgacaagttggaagcaatctccggt
ttgtctgccgaagaagcgaaagaacgtttggtggaatcactgaaagaggaagctaaaacg
caggctcagtcattcatcaacgacatcatggatgatgccaagctgactgccaacaaggaa
gcaaaacgtattgtcgttcagtctatccaaagggtagctacggaaactgccatcgagaac
tctgttacagtattccatatcgaatctgacgaaatcaaaggacgcattatcggacgcgaa
ggacgtaatatccgtgcactggaagcagccacaggtgttgaaatcgttgtagacgatact
cctgaagctatcgtgctttcagctttcgacccggttcgccgtgaaattgcacgcctggcc
ctgcatcaacttgttactgacggacgtattcatccggcacgtatcgaggaagtagtagct
aaagtacgcaaacaggtggaagaagaaatcatcgaaaccggtaaacgtactacaattgac
ctcggtatccacggtttgcatcctgaattgattcgtattatcggtaagatgaaatatcgt
tcttcttatggccagaacttgttgcagcatgcgcgtgaaacagccaacctttgtgctgtg
atggcatcggaattgggactgaatccgaagaaagcaaaacgtgcaggtttgctgcatgat
ataggtaaagtgcctgatgaagaaccggaattgccacacgcattgctgggtatgaagctt
gcagaaaaatataaggaaaaaccggatatctgcaacgctatcggtgctcaccatgatgaa
acggaaatgaccagtttgctggctcctatcgtgcaggtatgtgacgctatttcaggtgca
cgtccgggcgcacgccgcgaaatcgttgaggcttatatcaagcgtttgaacgatctcgaa
caattggctatggcttatccgggtgtaacaaagacatatgcaatccaggcaggacgcgaa
cttcgcgtaatcgttggtgcagataagattgatgataagcagactgaaaacctgtcgggc
gaaatcgctaagaagattcaggatgaaatgacttatccgggacaggtgaagattaccgtt
atccgtgaaacacgtgcggtcagcttcgctaagtaa

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