Bacteroides faecium: BacF7301_11950
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Entry
BacF7301_11950 CDS
T08751
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bfc
Bacteroides faecium
Pathway
bfc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BacF7301_11950 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfc03019
]
BacF7301_11950 (rny)
Messenger RNA biogenesis [BR:
bfc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BacF7301_11950 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
AAA_15
KH-I_KHDC4-BBP
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QIU94811
UniProt:
A0A6H0KP59
LinkDB
All DBs
Position
complement(3378738..3380273)
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AA seq
511 aa
AA seq
DB search
MIAIIATAIACFIVGGVFSYILFRYALKSRYENVLKEAETEAEVIKKNKLLEVKEKFLNK
KADLEKEVALRNQKIQQAENKLKQREMVLGQRQEEIQRKKMEAEAVKENLEAQLVIVDKK
KEELDKLQQQEIDKLEAISGLSAEEAKERLVESLKEEAKTQAQSFINDIMDDAKLTANKE
AKRIVVQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVAKVRKQVEEEIIETGKRTTID
LGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHD
IGKVPDEEPELPHALLGMKLAEKYKEKPDICNAIGAHHDETEMTSLLAPIVQVCDAISGA
RPGARREIVEAYIKRLNDLEQLAMAYPGVTKTYAIQAGRELRVIVGADKIDDKQTENLSG
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaataatagcaacagcaattgcttgcttcatcgtaggtggagtcttttcatac
atactattccggtatgctctgaaatccagatacgagaatgtcctgaaagaagcagagacg
gaagcggaagtaattaagaaaaacaagctgctggaagtgaaggagaagttcctgaacaaa
aaggcagaccttgaaaaggaggtagccctgaggaatcagaagattcagcaggcggaaaac
aaactgaaacaacgcgaaatggtgctcggacagcgccaggaagaaatccagcgcaagaag
atggaagccgaagctgtcaaagagaacctggaagcgcagttggtgattgtcgacaagaag
aaagaagaactggataaactgcaacaacaggaaattgacaagttggaagcaatctccggt
ttgtctgccgaagaagcgaaagaacgtttggtggaatcactgaaagaggaagctaaaacg
caggctcagtcattcatcaacgacatcatggatgatgccaagctgactgccaacaaggaa
gcaaaacgtattgtcgttcagtctatccaaagggtagctacggaaactgccatcgagaac
tctgttacagtattccatatcgaatctgacgaaatcaaaggacgcattatcggacgcgaa
ggacgtaatatccgtgcactggaagcagccacaggtgttgaaatcgttgtagacgatact
cctgaagctatcgtgctttcagctttcgacccggttcgccgtgaaattgcacgcctggcc
ctgcatcaacttgttactgacggacgtattcatccggcacgtatcgaggaagtagtagct
aaagtacgcaaacaggtggaagaagaaatcatcgaaaccggtaaacgtactacaattgac
ctcggtatccacggtttgcatcctgaattgattcgtattatcggtaagatgaaatatcgt
tcttcttatggccagaacttgttgcagcatgcgcgtgaaacagccaacctttgtgctgtg
atggcatcggaattgggactgaatccgaagaaagcaaaacgtgcaggtttgctgcatgat
ataggtaaagtgcctgatgaagaaccggaattgccacacgcattgctgggtatgaagctt
gcagaaaaatataaggaaaaaccggatatctgcaacgctatcggtgctcaccatgatgaa
acggaaatgaccagtttgctggctcctatcgtgcaggtatgtgacgctatttcaggtgca
cgtccgggcgcacgccgcgaaatcgttgaggcttatatcaagcgtttgaacgatctcgaa
caattggctatggcttatccgggtgtaacaaagacatatgcaatccaggcaggacgcgaa
cttcgcgtaatcgttggtgcagataagattgatgataagcagactgaaaacctgtcgggc
gaaatcgctaagaagattcaggatgaaatgacttatccgggacaggtgaagattaccgtt
atccgtgaaacacgtgcggtcagcttcgctaagtaa
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