KEGG   Bacteroides faecium: BacF7301_19185
Entry
BacF7301_19185    CDS       T08751                                 
Name
(GenBank) RtcB family protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
bfc  Bacteroides faecium
Brite
KEGG Orthology (KO) [BR:bfc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bfc03016]
    BacF7301_19185
Enzymes [BR:bfc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     BacF7301_19185
Transfer RNA biogenesis [BR:bfc03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    BacF7301_19185
 Prokaryotic type
   tRNA splicing ligases
    BacF7301_19185
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: QIU96144
UniProt: A0A6H0KRR4
LinkDB
Position
complement(5149419..5150588)
AA seq 389 aa
MEKVIMGTRVPAKLWLSEVEESCLSQIRDLTSLPFAFRHIAIMPDAHAGKGMPIGGVLAT
KGVIVPNAVGVDIGCGMCAIKTNRKAEDFNYTDLTSIMSKIRKVIPLGFDHQNKKQDKEL
LPQGFDLEEMPIVKNQYEACLKQIGTLGGGNHFIEIQKDTDTSDVWVMIHSGSRNVGLKV
ANHYNKIAQYWNEKWYSEMIPGLAYLPMETQMAKDYFHEMNFCVAFAFANRQLMMTRICE
SIQAVKPDTDFEPMINIAHNYAAWENHFDQNVIVHRKGATRAYEGEIGIIPGSMGTKSYI
VEGLGNPESFKSCSHGAGRLMGRKDACRRLSLEEETERMNQQGIIHGLRTQDGLDEAPGA
YKDIDQVIANERDLVKPLVELAPMAVIKG
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggaaaaagtaattatgggaacacgtgtacccgccaagctgtggttgagtgaagtagaa
gaatcctgtctgtcgcaaatccgcgatttgacttcacttcctttcgcattcaggcatatt
gctattatgcccgatgcccatgcgggaaaaggaatgcccattggcggtgtgctagctacg
aaaggtgtgattgttcccaatgctgtgggagtggatatcggatgcggaatgtgtgcgatt
aagacaaatcgtaaagcagaggatttcaattatacggacttgacttccattatgtcgaag
attcgtaaagttattcctttgggattcgaccatcagaataagaagcaggataaagaactg
cttcctcaaggatttgatttagaagaaatgccgattgtgaagaatcagtacgaagcctgt
ttgaagcagataggtacgttgggcggtggtaatcactttatagagattcagaaagatacg
gatacttccgatgtgtgggtgatgattcattcgggaagccgaaatgtcggtctgaaggtt
gccaatcattataataagatagcgcaatactggaacgagaaatggtactctgaaatgata
ccgggattggcttacctgcctatggagacacagatggcaaaagattatttccatgaaatg
aatttctgtgtggcttttgcctttgccaaccgtcagttgatgatgacacgtatctgtgaa
tccattcaagcggtgaagccggatacggacttcgagccgatgattaatattgcccataac
tatgcagcctgggaaaatcatttcgaccagaatgtaattgtacaccgaaaaggagcgacg
cgggcttatgaaggcgagattggtattattcccggttctatgggtactaagtcttatatt
gtcgaaggtttgggtaatccggagagtttcaagagttgctcgcacggtgcaggtcggttg
atgggaagaaaagatgcctgccgtcgtttgtcactggaagaagaaacggaacgaatgaat
caacaaggtatcattcacggactgcgtacacaggatggtcttgacgaagcaccgggagct
tataaagatatcgatcaagtgatagccaatgaacgggatttggtaaaaccattggtggaa
ctggctccgatggcagtgattaaaggataa

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