Bacillus freudenreichii: NCTC4823_00003
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Entry
NCTC4823_00003 CDS
T06767
Symbol
gyrA_1
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bfd
Bacillus freudenreichii
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfd03032
]
NCTC4823_00003 (gyrA_1)
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_00003 (gyrA_1)
Enzymes [BR:
bfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCTC4823_00003 (gyrA_1)
DNA replication proteins [BR:
bfd03032
]
Prokaryotic type
DNA Topoisomerases
NCTC4823_00003 (gyrA_1)
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC4823_00003 (gyrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
SHS2_Rpb7-N
WDR55
Motif
Other DBs
NCBI-ProteinID:
VEF46030
LinkDB
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Position
1:complement(2659..5154)
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AA seq
831 aa
AA seq
DB search
MSDMPDNVKEINLSQEMRSSFLDYAMSVIVARALPDVRDGLKPVHRRILYAMNDLGMTSD
KAYKKSARIVGEVIGKYHPHGDSAVYETMVRMAQDFSYRYMLVDGHGNFGSIDGDSAAAM
RYTEARMSKISMELVRDLNKDTIDYKDNYDGSEKEPAVLPSRFPNLLVNGSSGIAVGMAT
NIPPHQLGEVIDAIITLSRDPEITIQELMEHIQGPDFPTAGLIVGRSGIRRAYETGRGSI
MMRGKVEIETKANGRETIIVNELPFQVNKARLIERIAELVREKKIDGITELRDESDRVGM
RIVMEVRRDANANVILNNLYKMTALQTSFGINMLALVDGQPKVLNLKQCLYYYLEHQKVI
IRRRTEYELRKAEARAHILEGLRIALDHIDAIISLIRGSKTTDIARAGLMEQFSLSEKQA
QAILDMRLQRLTGLEREKIEEEYQNLVKLISELKAILADEEKILEIIREELLEVKERFDD
GRRTEIVAGGIGHLEDEDLIPRENVVVTLTHNGYIKRLPISTYRSQRRGGRGVQGMGTNE
DDFVEHLITTSTHDTILFFTNKGKVYRAKGYEIPEFSRTAKGLPIINLLGIEKGEWINTI
ICVEEFLEDWYLFFATKHGVVKRTPVSAFANIRTNGLIALNLREHDELISVKLTDNTKDI
VVGTKNGLLIRFNETDVRSMGRTATGVKGINLANDDEVIGMEILEEDHDVLVVTKNGFGK
RTPAADYRIQSRGGKGIITCNITERTGTVVAVETVKGDEDLMLITAGGVLIRMSVEDISV
LGRNTQGVILIRLDDEESVATVAKVEKTEGLEEISTTPSDEEITGEELYES
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacatgcctgataacgtaaaagaaattaatttaagccaggaaatgcgctcttca
ttccttgattatgcgatgagcgttatcgttgctcgtgccctacccgatgtccgggacggt
ttaaaaccggttcaccgccggattttatatgcgatgaatgatcttggaatgacgagtgat
aaggcatataaaaagtcggctaggattgtcggcgaagtaatcgggaagtatcatccgcac
ggagactcggctgtttatgaaacaatggtccggatggctcaggacttcagctaccggtat
atgcttgtggacggccatgggaacttcggttcgattgacggagactcagcggccgccatg
cggtatacggaagcaagaatgtcaaaaatttcaatggaactcgttagagacctgaataag
gacaccatagattataaagacaattacgatgggtcggaaaaagaacctgccgttctgcct
tctcgttttccgaatttgcttgtcaacggttcatcaggaatcgctgtcggtatggcaacg
aatattcctcctcatcagctgggcgaagtgatagacgcgatcatcacactaagccgagat
cctgaaatcaccattcaggaattgatggagcatattcaagggccggattttccgaccgcc
gggctgattgtcggcagaagcggtatcagaagagcctatgaaacaggccgtggttctatt
atgatgcggggcaaagtggagattgaaacaaaagccaatggaagggaaacaatcattgtc
aatgagctcccattccaggtgaataaagcaaggctcattgagcggattgctgaacttgta
cgagaaaagaagatcgatggcattaccgagctgagggacgagtccgaccgcgtaggaatg
agaattgtcatggaagtgcgcagggatgcaaatgccaacgtcatcttaaacaatctatat
aaaatgacagcactccagacaagcttcgggatcaatatgcttgcacttgtcgatggccag
ccgaaggttttgaatttaaaacaatgtctctattactatttggagcatcagaaagtcatc
atcagaaggcgtacggaatatgaacttcgcaaagcggaagcgcgtgcccatattcttgaa
ggcctgcggattgccttggatcatatcgatgctatcatcagcctgatcagaggctcaaag
actacagatattgcccgtgccgggttaatggagcaattcagtctgagtgaaaagcaggca
caagctattcttgatatgagactccagcgcttgactggtctggaaagagaaaagattgag
gaagaatatcaaaatcttgtcaaactgatttctgaactgaaggcgattttggctgacgag
gaaaaaatccttgaaatcatcagagaagagcttcttgaagtcaaagagcgctttgacgat
ggccgccggactgagattgttgcgggcggtatcggtcacctggaagacgaagatttaata
ccaagagagaatgtcgttgtcacgcttacgcataacggctatattaaacgtcttccaatt
tcaacatatagaagccaaagacgcggcggccgcggcgtgcagggaatgggtacaaatgag
gatgattttgtcgaacatctgattacgacatccactcatgatacgattttgttttttaca
aacaaagggaaagtgtatcgtgcaaagggatatgagattcctgaattcagtagaacagcc
aaaggtctgccgatcataaacctgcttggcatagaaaaaggcgaatggatcaacactatt
atctgtgttgaggaatttcttgaggattggtatttgttctttgcgacgaaacatggtgtg
gtgaaacggacgccggtatcagcatttgccaatataagaacaaatggtttgattgcactg
aatcttagagagcacgatgaactgatctccgtcaaattgactgacaataccaaagacatc
gttgttggtacgaaaaacggtctcttaatccgtttcaatgaaaccgacgtacgttcaatg
ggaagaacggctacaggggtaaaaggaattaatctagccaatgacgatgaagtcattggc
atggaaattcttgaagaagatcatgatgttcttgtggtcacgaaaaatggtttcggtaaa
cgaacaccagctgcagattacagaatccaatcgcgcggtggaaaaggaatcattacgtgc
aatatcacagaaagaacaggtactgtcgtagcagttgaaacggttaaaggcgatgaggat
ctcatgctcatcactgctggaggcgttttgatcaggatgtctgttgaagatatttcagtt
cttggccgaaatacccaaggtgtcattttaattaggctggacgatgaagaatctgtcgcc
actgtcgcaaaagtggaaaaaaccgaaggacttgaagaaatttcaacaacgccaagtgac
gaggaaattactggcgaagaattatatgaatcttaa
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