Bacillus freudenreichii: NCTC4823_00088
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Entry
NCTC4823_00088 CDS
T06767
Name
(GenBank) phage SPO1 DNA polymerase-like protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bfd
Bacillus freudenreichii
Pathway
bfd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC4823_00088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_00088
Enzymes [BR:
bfd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NCTC4823_00088
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC4823_00088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
ScdA_N
Motif
Other DBs
NCBI-ProteinID:
VEF46113
LinkDB
All DBs
Position
1:97029..97607
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AA seq
192 aa
AA seq
DB search
MDTFCPEIWPEDSTPASQKNCRDCGLFEQGSRMIWGEGNPKAPIMIILDNPGAREDREGN
PMVCGTRQTLQRAAHEAGLDKDDIYITYILKRRPIRAYDKEKTRAICMHHLEEQLQHHKP
KLLACLGNVAVQSFFRNPELDVKGLRGNWYEVNGFWTTVAYHPLAARRRPNLYPLLLQDL
QLVAEEWDKLKV
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggacactttttgcccggaaatctggccggaagactctaccccggcatcccagaagaat
tgcagggattgcggtttattcgaacaagggtcccggatgatatggggagaggggaatccg
aaagcgcctatcatgattattctggataatcccggcgcacgcgaagatcgcgaagggaac
ccgatggtctgcggaacgcggcagacattgcagagagcggcccatgaagctggtttggat
aaagatgatatatatataacctatattttaaaaagaaggcctatccgcgcatatgacaaa
gagaagacgcgagccatctgcatgcatcatttagaagaacagctgcaacaccataagccc
aaacttcttgcctgtctggggaatgtcgctgtgcaatccttttttcggaatccggagctc
gatgtaaaaggattgagaggcaactggtacgaggtgaatggcttttggacaactgtggct
taccacccccttgctgctagacgcagacccaatttataccctctactacttcaagacctt
cagcttgttgcggaggagtgggataagttgaaggtataa
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